RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GCSHP23434 173 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 DIAPH2-AS1Q14236 149 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 PSG5Q15238 335 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 LGALS9BQ3B8N2 356 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 C10orf128Q5T292 105 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 LGALS9CQ6DKI2 356 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 ZFAND6Q6FIF0 208 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 MIR17HGQ75NE6 70 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 TDHQ8IZJ6 230 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 BCL6BQ8N143 479 aaPredicted RBP7.8□□□□□ -1.16
SIX4-202ENST00000554079 SSMEM1Q8WWF3 244 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 PRELID3AQ96N28 172 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 TMEM167BQ9NRX6 74 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
SIX4-202ENST00000554079 LSM4Q9Y4Z0 139 aaKnown RBP7.8□□□□□ -1.16
SIX4-202ENST00000554079 F11RQ9Y624 299 aaKnown RBP7.8□□□□□ -1.16
SIX4-202ENST00000554079 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.79□□□□□ -1.16
SIX4-202ENST00000554079 TCRBV4S1A1TA0A5B7 111 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 C3orf80F5H4A9 247 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 M0QXV9 152 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 PRTN3P24158 256 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GNG3P63215 75 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 C3AR1Q16581 482 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 Q6ZS92 163 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 ABHD12Q8N2K0 398 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 TMEM178AQ8NBL3 297 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GLMPQ8WWB7 406 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 OXGR1Q96P68 337 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 SRSF8Q9BRL6 282 aaKnown RBP7.79□□□□□ -1.16
SIX4-202ENST00000554079 PKIBQ9C010 78 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GAGE12JA6NER3 117 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GAGE7O76087 117 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 MT-CO3P00414 261 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GAGE12FP0CL80 117 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GAGE12GP0CL81 117 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GAGE12IP0CL82 117 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 GAGE4Q13068 117 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 EIF4EBP1Q13541 118 aaPredicted RBP7.79□□□□□ -1.16
SIX4-202ENST00000554079 TRAT1Q6PIZ9 186 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 AMTNQ6UX39 209 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 NFE4Q86UQ8 179 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 ZNF441Q8N8Z8 693 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.79□□□□□ -1.16
SIX4-202ENST00000554079 C8orf46Q8TAG6 207 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 PIGCQ92535 297 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 FGF23Q9GZV9 251 aaPredicted RBP7.79□□□□□ -1.16
SIX4-202ENST00000554079 PRO3102Q9H379 93 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 ABCA7Q8IZY2 2146 aa7.79□□□□□ -1.16
SIX4-202ENST00000554079 USF3Q68DE3 2245 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 NPIPB5A8MRT5 1133 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 RBP4P02753 201 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 PPIFP30405 207 aaKnown RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 SMCPP49901 116 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 TCTAP57738 103 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 RPL30P62888 115 aaKnown RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 ZNF816Q0VGE8 651 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 MOGAT3Q86VF5 341 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 CDX2Q99626 313 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 NHP2Q9NX24 153 aaKnown RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 A0A096LNJ9 63 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 CENPVL3A0A0U1RRI6 287 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 CCL16O15467 120 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 SYNGR3O43761 229 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 SRD5A1P18405 259 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 SUMO3P55854 103 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 DSCR4P56555 118 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 BRWD1-AS2P59051 145 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 KRTAP27-1Q3LI81 207 aa7.78□□□□□ -1.16
SIX4-202ENST00000554079 TSACCQ96A04 125 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 MMABQ96EY8 250 aaPredicted RBP7.78□□□□□ -1.16
SIX4-202ENST00000554079 IGKV3D-11A0A0A0MRZ8 115 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 A0A1W2PNR3 127 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 C5orf49A4QMS7 147 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 RHODO00212 210 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PRRG2O14669 202 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 ERVK11-1P61568 191 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PRR20EP86478 221 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PRR20CP86479 221 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PRR20DP86480 221 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PRR20BP86481 221 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PRR20AP86496 221 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PLP2Q04941 152 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 GAB4Q2WGN9 574 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 YRDCQ86U90 279 aaKnown RBP7.77□□□□□ -1.17
SIX4-202ENST00000554079 TEX29Q8N6K0 151 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 PATE1Q8WXA2 126 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 CHAC1Q9BUX1 264 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 TIMM8BQ9Y5J9 83 aaPredicted RBP7.77□□□□□ -1.17
SIX4-202ENST00000554079 SOX21Q9Y651 276 aaPredicted RBP7.77□□□□□ -1.17
SIX4-202ENST00000554079 LTBP2Q14767 1821 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 ESPL1Q14674 2120 aa7.77□□□□□ -1.17
SIX4-202ENST00000554079 TRAV24A0A0B4J272 114 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 A0A1W2PQM1 296 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 NPIPB6E9PJ23 425 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 LINC00271P0C7V0 271 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 CT45A10P0DMU9 189 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms