RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 C4orf22Q6V702 233 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 TMEM136Q6ZRR5 245 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 MIR17HGQ75NE6 70 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 SLC35E3Q7Z769 313 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 OR8I2Q8N0Y5 310 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 RPRMLQ8N4K4 120 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 C1orf64Q8NEQ6 169 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 WFDC11Q8NEX6 87 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 NUP35Q8NFH5 326 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 OR8J3Q8NGG0 315 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 OR51T1Q8NGJ9 327 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 OR4C16Q8NGL9 310 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 OR2T10Q8NGZ9 312 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 CLDND2Q8NHS1 167 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 WFDC5Q8TCV5 224 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 SMCR5Q8TEV8 140 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 TMEM106AQ96A25 262 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 ZC2HC1AQ96GY0 325 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 ZNF714Q96N38 554 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 HIST1H2BLQ99880 126 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 SLC25A21Q9BQT8 299 aaPredicted RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 TM2D3Q9BRN9 247 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 XAGE1AQ9HD64 81 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 MRPL16Q9NX20 251 aaKnown RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 NAT8BQ9UHF3 227 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 RBM7Q9Y580 266 aaKnown RBP1.33□□□□□ -2.2
SRP54-204ENST00000553923 HEY1Q9Y5J3 304 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 CCDC171Q6TFL3 1326 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 CEP170Q5SW79 1584 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 KIF24Q5T7B8 1368 aa1.33□□□□□ -2.2
SRP54-204ENST00000553923 LRP4O75096 1905 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 SSH2Q76I76 1423 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 DENND4BO75064 1496 aaPredicted RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 MYO5BQ9ULV0 1848 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 IGLV4-60A0A075B6I1 120 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 A0A087WX48 190 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 BORCS7-ASMTA0A0B4J1R7 106 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 TRDV1A0A1B0GX56 115 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 TMEM235A6NFC5 223 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 EFCAB10A6NFE3 127 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 TLCD2A6NGC4 264 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 H3BPC8 53 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 RPL36A-HNRNPH2H7BZ11 118 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 M0R2Z0 102 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 NDUFA2O43678 99 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 GGCTO75223 188 aaKnown RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 C1QAP02745 245 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 UCHL1P09936 223 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 UBBP0CG47 229 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 SDC2P34741 201 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 EVX1P49640 407 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 FOXA1P55317 472 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 NDUFA6P56556 154 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 SLC38A11Q08AI6 406 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 PLCXD2Q0VAA5 305 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 KPRPQ5T749 579 aaPredicted RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 C1orf140Q5VVS0 124 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 EIF5AL1Q6IS14 154 aaKnown RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 Q6ZS52 159 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 TCTE3Q8IZS6 198 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 LRRC18Q8N456 261 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 RNF182Q8N6D2 247 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 OR5A1Q8NGJ0 315 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 OR4K15Q8NH41 348 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 TERB2Q8NHR7 220 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 MUC7Q8TAX7 377 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 SLAMF6Q96DU3 332 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 ADAT1Q9BUB4 502 aaKnown RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 HIGD2AQ9BW72 106 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 MRPL32Q9BYC8 188 aaKnown RBP1.32□□□□□ -2.2
SRP54-204ENST00000553923 SMIM3Q9BZL3 60 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 OR2H1Q9GZK4 316 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 POPDC3Q9HBV1 291 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 OTORQ9NRC9 128 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 CALML5Q9NZT1 146 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 MED31Q9Y3C7 131 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 MIA3Q5JRA6 1907 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 NID2Q14112 1375 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 TECPR2O15040 1411 aa1.32□□□□□ -2.2
SRP54-204ENST00000553923 MYO10Q9HD67 2058 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 IGKV2-28A0A075B6P5 120 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 IGHV3-15A0A0B4J1V0 119 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 A0A0J9YX75 114 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 CCDC160A6NGH7 325 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 RFPL4AA6NLU0 287 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 C5orf58C9J3I9 102 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 C9JAW5 83 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 RFPL4AL1F8VTS6 287 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 H7BYZ3 331 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 K7ERJ3 54 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 M0R378 163 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 OVOL1O14753 267 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 GNRH2O43555 120 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 NDUFB3O43676 98 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 DPM2O94777 84 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 TNFSF15O95150 251 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 IGKV2D-28P01615 120 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms