RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 EIF2B2P49770 351 aaKnown RBP12.78□□□□□ -0.36
SYNE2-211ENST00000553801 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYNE2-211ENST00000553801 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 LGALS9BQ3B8N2 356 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 ACTL10Q5JWF8 245 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 TBC1D26Q86UD7 250 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 CSNK1G2-AS1Q8NCQ2 148 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 CLEC5AQ9NY25 188 aa12.78□□□□□ -0.36
SYNE2-211ENST00000553801 CRYBB3P26998 211 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 TSPAN5P62079 268 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 TMEM230Q96A57 120 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 CELA1Q9UNI1 258 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 DNAH11Q96DT5 4516 aa12.77□□□□□ -0.37
SYNE2-211ENST00000553801 DYNC1H1Q14204 4646 aaKnown RBP12.76□□□□□ -0.37
SYNE2-211ENST00000553801 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 IGKV1-39P01597 117 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 IGKV1D-39P04432 117 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 PRSS3P35030 304 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 HRH1P35367 487 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
SYNE2-211ENST00000553801 TMEM69Q5SWH9 247 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 DCANP1Q8TF63 244 aa12.76□□□□□ -0.37
SYNE2-211ENST00000553801 HELTA6NFD8 242 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 CLN5O75503 358 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 IFNA10P01566 189 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 AP2S1P53680 142 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-211ENST00000553801 TAS2R20P59543 309 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 UBE2NLQ5JXB2 153 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 ZNF767PQ75MW2 155 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 RAB40CQ96S21 281 aa12.75□□□□□ -0.37
SYNE2-211ENST00000553801 IFNA21P01568 189 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 IFNA17P01571 189 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 HLA-DMAP28067 261 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 PPP5CP53041 499 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 UCP3P55916 312 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 DHRS2Q13268 280 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 LYSMD2Q8IV50 215 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
SYNE2-211ENST00000553801 YTHDF1Q9BYJ9 559 aaKnown RBP12.74□□□□□ -0.37
SYNE2-211ENST00000553801 TRAV30A0A087WSZ9 112 aa12.73□□□□□ -0.37
SYNE2-211ENST00000553801 OPRK1P41145 380 aa12.73□□□□□ -0.37
SYNE2-211ENST00000553801 PSMG4Q5JS54 123 aa12.73□□□□□ -0.37
SYNE2-211ENST00000553801 SOHLH1Q5JUK2 328 aa12.73□□□□□ -0.37
SYNE2-211ENST00000553801 UBE2DNLQ8IWF7 75 aa12.73□□□□□ -0.37
SYNE2-211ENST00000553801 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
SYNE2-211ENST00000553801 ATG12O94817 140 aa12.72□□□□□ -0.37
SYNE2-211ENST00000553801 RNASE2P10153 161 aaKnown RBP12.72□□□□□ -0.37
SYNE2-211ENST00000553801 RPL5P46777 297 aaKnown RBP12.72□□□□□ -0.37
SYNE2-211ENST00000553801 SNRPD3P62318 126 aaKnown RBP12.72□□□□□ -0.37
SYNE2-211ENST00000553801 SAMD12Q8N8I0 201 aa12.72□□□□□ -0.37
SYNE2-211ENST00000553801 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
SYNE2-211ENST00000553801 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.37
SYNE2-211ENST00000553801 HOXA1P49639 335 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-211ENST00000553801 AKR1C2P52895 323 aa12.71□□□□□ -0.37
SYNE2-211ENST00000553801 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.37
SYNE2-211ENST00000553801 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-211ENST00000553801 SEPSECSQ9HD40 501 aaKnown RBP12.71□□□□□ -0.37
SYNE2-211ENST00000553801 XCL2Q9UBD3 114 aa12.71□□□□□ -0.37
SYNE2-211ENST00000553801 U3KQE9 123 aa12.71□□□□□ -0.37
SYNE2-211ENST00000553801 A0A0B4J293 547 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 TIGITQ495A1 244 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 GPX8Q8TED1 209 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 Q8WTZ3 238 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 NEU1Q99519 415 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 SCRT1Q9BWW7 348 aa12.7□□□□□ -0.38
SYNE2-211ENST00000553801 MRPL36Q9P0J6 103 aaKnown RBP12.7□□□□□ -0.38
SYNE2-211ENST00000553801 PKD1P98161 4303 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 RPS10-NUDT3A0A1W2PQS6 291 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 IGKV1-17P01599 117 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 IGKV1-5P01602 117 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 CD74P04233 296 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 HNRNPCP07910 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
SYNE2-211ENST00000553801 ETV6P41212 452 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 MLANAQ16655 118 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 Q6ZR54 194 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 GLMPQ8WWB7 406 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 Q9H521 79 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
SYNE2-211ENST00000553801 IGLV2-18A0A075B6J9 118 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 TEX48A0A1B0GUV7 120 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 SMIM31A0A1B0GVY4 71 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 H3BMM0 161 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 P0C879 139 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 PGAM2P15259 253 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 RND3P61587 244 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 OR1S2Q8NGQ3 325 aa12.68□□□□□ -0.38
SYNE2-211ENST00000553801 ZNF486Q96H40 463 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-211ENST00000553801 FAM90A26D6RGX4 464 aa12.67□□□□□ -0.38
SYNE2-211ENST00000553801 RCVRNP35243 200 aa12.67□□□□□ -0.38
SYNE2-211ENST00000553801 RNF212Q495C1 297 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms