RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
TDP1-207ENST00000553617 C1orf174Q8IYL3 243 aa2.53□□□□□ -2
TDP1-207ENST00000553617 C3orf22Q8N5N4 141 aa2.53□□□□□ -2
TDP1-207ENST00000553617 OR2T10Q8NGZ9 312 aa2.53□□□□□ -2
TDP1-207ENST00000553617 MRPL30Q8TCC3 161 aaKnown RBP2.53□□□□□ -2
TDP1-207ENST00000553617 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
TDP1-207ENST00000553617 MS4A6EQ96DS6 147 aa2.53□□□□□ -2
TDP1-207ENST00000553617 ZNF799Q96GE5 643 aa2.53□□□□□ -2
TDP1-207ENST00000553617 ZC2HC1AQ96GY0 325 aa2.53□□□□□ -2
TDP1-207ENST00000553617 ABHD14BQ96IU4 210 aa2.53□□□□□ -2
TDP1-207ENST00000553617 YPEL4Q96NS1 127 aa2.53□□□□□ -2
TDP1-207ENST00000553617 PEBP4Q96S96 227 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SDF2Q99470 211 aa2.53□□□□□ -2
TDP1-207ENST00000553617 CCL13Q99616 98 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SPIN2AQ99865 258 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SPIN2BQ9BPZ2 258 aa2.53□□□□□ -2
TDP1-207ENST00000553617 MIEN1Q9BRT3 115 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SPANXDQ9BXN6 97 aa2.53□□□□□ -2
TDP1-207ENST00000553617 WDR61Q9GZS3 305 aaKnown RBP2.53□□□□□ -2
TDP1-207ENST00000553617 CCDC167Q9P0B6 97 aa2.53□□□□□ -2
TDP1-207ENST00000553617 TAAR3PQ9P1P4 343 aa2.53□□□□□ -2
TDP1-207ENST00000553617 CKLFQ9UBR5 152 aa2.53□□□□□ -2
TDP1-207ENST00000553617 AK3Q9UIJ7 227 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SBF1O95248 1867 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SIGLEC1Q9BZZ2 1709 aa2.53□□□□□ -2
TDP1-207ENST00000553617 THOC2Q8NI27 1593 aaKnown RBP2.53□□□□□ -2.01
TDP1-207ENST00000553617 ATG2BQ96BY7 2078 aa2.53□□□□□ -2.01
TDP1-207ENST00000553617 FANCMQ8IYD8 2048 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 MYOM2P54296 1465 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 TEX14Q8IWB6 1497 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 FMN1Q68DA7 1419 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ADAMTS13Q76LX8 1427 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 IGLV1-50A0A075B6I6 118 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 A0A087X0T9 212 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 CCL15-CCL14A0A0B4J2E2 113 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 IGHV5-10-1A0A0J9YXX1 117 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ARRDC5A6NEK1 342 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 A8MUN3 132 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 COX7A2LO14548 114 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 UBE2L6O14933 153 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 KRASP01116 189 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 HLA-DQB1P01920 261 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 IGHV1-8P0DP01 117 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 IL7P13232 177 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 PSMB8P28062 276 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 TMBIM6P55061 237 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 LINC00313P59037 77 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 RPL26P61254 145 aaKnown RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 RPL23P62829 140 aaKnown RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 UBA52P62987 128 aaKnown RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 HES1Q14469 280 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 PDGFRLQ15198 375 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 SP6Q3SY56 376 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 FAM74A1Q5RGS3 127 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 C1orf140Q5VVS0 124 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 EBLN2Q6P2I7 272 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 FOXI2Q6ZQN5 318 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 LRP11Q86VZ4 500 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 TTC9CQ8N5M4 171 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 TEX29Q8N6K0 151 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ZFP62Q8NB50 900 aaPredicted RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 OR4K13Q8NH42 304 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 SGMS2Q8NHU3 365 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ZNF721Q8TF20 911 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 C15orf40Q8WUR7 153 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 BRK1Q8WUW1 75 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 RTN4IP1Q8WWV3 396 aaPredicted RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 C2orf50Q96LR7 162 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 LINC00052Q96N35 136 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ANAPC11Q9NYG5 84 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 MARCOQ9UEW3 520 aaPredicted RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 FUT9Q9Y231 359 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ZNF706Q9Y5V0 76 aaPredicted RBP2.52□□□□□ -2.01
TDP1-207ENST00000553617 ATG2AQ2TAZ0 1938 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 LOXHD1Q8IVV2 1947 aa2.52□□□□□ -2.01
TDP1-207ENST00000553617 ATRNO75882 1429 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 TNS2Q63HR2 1409 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 SETD1AO15047 1707 aaKnown RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 MYH9P35579 1960 aaKnown RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 SMARCA4P51532 1647 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 A0A096LNJ9 63 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 TRAV41A0A0B4J266 112 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 ZNF705GA8MUZ8 300 aaPredicted RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 C11orf94C9JXX5 98 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 TAX1BP3O14907 124 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 FSTL3O95633 263 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 TNFP01375 233 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 PMP2P02689 132 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 CTSDP07339 412 aaPredicted RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 CRYGSP22914 178 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 IL3RAP26951 378 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 CA7P43166 264 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 AKR1C2P52895 323 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 FOXA1P55317 472 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 BTG2P78543 158 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 HOXC5Q00444 222 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 PLGLB1Q02325 96 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms