RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ADAMTSL5Q6ZMM2 481 aa17.33■□□□□ 0.36
TDP1-206ENST00000553569 MITD1Q8WV92 249 aa17.33■□□□□ 0.36
TDP1-206ENST00000553569 TMEM170AQ8WVE7 144 aa17.33■□□□□ 0.36
TDP1-206ENST00000553569 MAGT1Q9H0U3 335 aa17.33■□□□□ 0.36
TDP1-206ENST00000553569 SIGLEC8Q9NYZ4 499 aa17.33■□□□□ 0.36
TDP1-206ENST00000553569 TMEM213A2RRL7 107 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 A8MWP6 167 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 CTSGP08311 255 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 FOLR2P14207 255 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 FCGR2BP31994 310 aaPredicted RBP17.32■□□□□ 0.36
TDP1-206ENST00000553569 NPBWR1P48145 328 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 MLANAQ16655 118 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 TM4SF20Q53R12 229 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 TMEM190Q8WZ59 177 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 PALMDQ9NP74 551 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 SORL1Q92673 2214 aa17.32■□□□□ 0.36
TDP1-206ENST00000553569 IGHV3OR16-8A0A075B7F1 116 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 RPS10-NUDT3A0A1W2PQS6 291 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 FAM90A26D6RGX4 464 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 GP9P14770 177 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 DEFB121Q5J5C9 76 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 C20orf24Q9BUV8 137 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 MRPL36Q9P0J6 103 aaKnown RBP17.31■□□□□ 0.36
TDP1-206ENST00000553569 UFC1Q9Y3C8 167 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 SELENOKQ9Y6D0 94 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 U3KQ87 197 aa17.31■□□□□ 0.36
TDP1-206ENST00000553569 NDUFA4O00483 81 aa17.3■□□□□ 0.36
TDP1-206ENST00000553569 MED6O75586 246 aa17.3■□□□□ 0.36
TDP1-206ENST00000553569 RELQ04864 619 aaPredicted RBP17.3■□□□□ 0.36
TDP1-206ENST00000553569 NOXA1Q86UR1 476 aa17.3■□□□□ 0.36
TDP1-206ENST00000553569 UXS1Q8NBZ7 420 aa17.3■□□□□ 0.36
TDP1-206ENST00000553569 RNASEH2CQ8TDP1 164 aaKnown RBP17.3■□□□□ 0.36
TDP1-206ENST00000553569 ZNF431Q8TF32 576 aaPredicted RBP17.3■□□□□ 0.36
TDP1-206ENST00000553569 CCSO14618 274 aa17.29■□□□□ 0.36
TDP1-206ENST00000553569 CBLN1P23435 193 aa17.29■□□□□ 0.36
TDP1-206ENST00000553569 DEFA1P59665 94 aa17.29■□□□□ 0.36
TDP1-206ENST00000553569 DEFA3P59666 94 aa17.29■□□□□ 0.36
TDP1-206ENST00000553569 NRARPQ7Z6K4 114 aa17.29■□□□□ 0.36
TDP1-206ENST00000553569 PAIP2BQ9ULR5 123 aaKnown RBP17.29■□□□□ 0.36
TDP1-206ENST00000553569 IZUMO1RA6ND01 250 aa17.28■□□□□ 0.36
TDP1-206ENST00000553569 WRBO00258 174 aa17.28■□□□□ 0.36
TDP1-206ENST00000553569 ZNF207O43670 478 aaKnown RBP17.28■□□□□ 0.36
TDP1-206ENST00000553569 SYNGR2O43760 224 aa17.28■□□□□ 0.36
TDP1-206ENST00000553569 YIF1AO95070 293 aa17.28■□□□□ 0.36
TDP1-206ENST00000553569 IAH1Q2TAA2 248 aaPredicted RBP17.28■□□□□ 0.36
TDP1-206ENST00000553569 CD300EQ496F6 205 aaPredicted RBP17.28■□□□□ 0.36
TDP1-206ENST00000553569 LCN12Q6JVE5 192 aa17.28■□□□□ 0.36
TDP1-206ENST00000553569 OR4X1Q8NH49 305 aa17.28■□□□□ 0.36
TDP1-206ENST00000553569 PRKDCP78527 4128 aaKnown RBP17.28■□□□□ 0.36
TDP1-206ENST00000553569 IFNA4P05014 189 aa17.27■□□□□ 0.36
TDP1-206ENST00000553569 RND2P52198 227 aa17.27■□□□□ 0.36
TDP1-206ENST00000553569 C12orf45Q8N5I9 185 aaPredicted RBP17.27■□□□□ 0.36
TDP1-206ENST00000553569 OR4D5Q8NGN0 318 aa17.27■□□□□ 0.36
TDP1-206ENST00000553569 ZNF414Q96IQ9 312 aa17.27■□□□□ 0.36
TDP1-206ENST00000553569 OR10C1Q96KK4 312 aa17.27■□□□□ 0.36
TDP1-206ENST00000553569 CIB3Q96Q77 187 aaPredicted RBP17.27■□□□□ 0.36
TDP1-206ENST00000553569 C15orf62A8K5M9 175 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 CLN5O75503 358 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 TMEM50AO95807 157 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 SCGB1D2O95969 90 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 SLC25A4P12235 298 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 NKX2-1P43699 371 aaPredicted RBP17.26■□□□□ 0.35
TDP1-206ENST00000553569 ELLP55199 621 aaPredicted RBP17.26■□□□□ 0.35
TDP1-206ENST00000553569 DEFB114Q30KQ6 69 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 ETFRF1Q6IPR1 90 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 BTNL8Q6UX41 500 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 SLC16A13Q7RTY0 426 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 OR2K2Q8NGT1 345 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 DAZ1Q9NQZ3 744 aaKnown RBP17.26■□□□□ 0.35
TDP1-206ENST00000553569 GSKIPQ9P0R6 139 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 MLXQ9UH92 298 aa17.26■□□□□ 0.35
TDP1-206ENST00000553569 FAM25EA8MYX2 175 aa17.25■□□□□ 0.35
TDP1-206ENST00000553569 SCGB2A1O75556 95 aa17.25■□□□□ 0.35
TDP1-206ENST00000553569 POLR2GP62487 172 aaKnown RBP eCLIP17.25■□□□□ 0.35
TDP1-206ENST00000553569 PRSS54Q6PEW0 395 aa17.25■□□□□ 0.35
TDP1-206ENST00000553569 ZBTB8BQ8NAP8 495 aaPredicted RBP17.25■□□□□ 0.35
TDP1-206ENST00000553569 MARC2Q969Z3 335 aa17.25■□□□□ 0.35
TDP1-206ENST00000553569 ACY3Q96HD9 319 aa17.25■□□□□ 0.35
TDP1-206ENST00000553569 TECRQ9NZ01 308 aaKnown RBP17.25■□□□□ 0.35
TDP1-206ENST00000553569 H3BP45 60 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 SSSCA1O60232 199 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 IL5P05113 134 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 ATP5IP56385 69 aaPredicted RBP17.24■□□□□ 0.35
TDP1-206ENST00000553569 RAB11AP62491 216 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 ID3Q02535 119 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 CD69Q07108 199 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 DCTN2Q13561 401 aaKnown RBP17.24■□□□□ 0.35
TDP1-206ENST00000553569 TIGITQ495A1 244 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 ZNF600Q6ZNG1 722 aa17.24■□□□□ 0.35
TDP1-206ENST00000553569 MRPL27Q9P0M9 148 aaKnown RBP17.24■□□□□ 0.35
TDP1-206ENST00000553569 C5orf51A6NDU8 294 aa17.23■□□□□ 0.35
TDP1-206ENST00000553569 C8orf88P0DMB2 117 aa17.23■□□□□ 0.35
TDP1-206ENST00000553569 RPP30P78346 268 aaKnown RBP17.23■□□□□ 0.35
TDP1-206ENST00000553569 GUCA2BQ16661 112 aa17.23■□□□□ 0.35
TDP1-206ENST00000553569 SPANXN5Q5MJ07 72 aa17.23■□□□□ 0.35
TDP1-206ENST00000553569 TOMM20LQ6UXN7 152 aa17.23■□□□□ 0.35
TDP1-206ENST00000553569 LSM4Q9Y4Z0 139 aaKnown RBP17.23■□□□□ 0.35
TDP1-206ENST00000553569 PUS1Q9Y606 427 aaKnown RBP eCLIP17.23■□□□□ 0.35
TDP1-206ENST00000553569 INMT-MINDY4F8WBC2 141 aa17.22■□□□□ 0.35
TDP1-206ENST00000553569 TMEM61Q8N0U2 210 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms