RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GGTLC1Q9BX51 225 aa13.51□□□□□ -0.25
SHMT2-206ENST00000553529 TRAV25A0A0B4J276 109 aa13.5□□□□□ -0.25
SHMT2-206ENST00000553529 CCDC160A6NGH7 325 aa13.5□□□□□ -0.25
SHMT2-206ENST00000553529 K7EMT4 169 aa13.5□□□□□ -0.25
SHMT2-206ENST00000553529 NOL3O60936 208 aaKnown RBP13.5□□□□□ -0.25
SHMT2-206ENST00000553529 TMEM50AO95807 157 aa13.5□□□□□ -0.25
SHMT2-206ENST00000553529 FCGR2BP31994 310 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-206ENST00000553529 SNCAP37840 140 aa13.5□□□□□ -0.25
SHMT2-206ENST00000553529 KLF9Q13886 244 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-206ENST00000553529 BSXQ3C1V8 233 aa13.5□□□□□ -0.25
SHMT2-206ENST00000553529 RBPMSQ93062 196 aaKnown RBP13.5□□□□□ -0.25
SHMT2-206ENST00000553529 PUS1Q9Y606 427 aaKnown RBP eCLIP13.5□□□□□ -0.25
SHMT2-206ENST00000553529 LOC102724200A0A096LPH7 203 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-206ENST00000553529 INS-IGF2F8WCM5 200 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 AKR1C4P17516 323 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 OPRK1P41145 380 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-206ENST00000553529 TIGITQ495A1 244 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 FAM90A2PQ658T7 463 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 GSG1LQ6UXU4 331 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 LYZL2Q7Z4W2 148 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 WFDC3Q8IUB2 231 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 PDCD10Q9BUL8 212 aa13.49□□□□□ -0.25
SHMT2-206ENST00000553529 SURF2Q15527 256 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-206ENST00000553529 DEFB135Q30KP9 77 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 PYDC2Q56P42 97 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 DUSP18Q8NEJ0 188 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 TXN2Q99757 166 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 PRRT1Q99946 306 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 TMEM56-RWDD3S4R434 201 aa13.48□□□□□ -0.25
SHMT2-206ENST00000553529 LYSTQ99698 3801 aa13.47□□□□□ -0.25
SHMT2-206ENST00000553529 TRAV14DV4A0A0A6YYC5 116 aa13.47□□□□□ -0.25
SHMT2-206ENST00000553529 DFFBO76075 338 aa13.47□□□□□ -0.25
SHMT2-206ENST00000553529 AARDQ4LEZ3 155 aa13.47□□□□□ -0.25
SHMT2-206ENST00000553529 TCF24Q7RTU0 167 aa13.47□□□□□ -0.25
SHMT2-206ENST00000553529 RSL24D1Q9UHA3 163 aaKnown RBP13.47□□□□□ -0.25
SHMT2-206ENST00000553529 CEBPZOSA8MTT3 80 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 IGKV1-17P01599 117 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 SPCS3P61009 180 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 DHODHQ02127 395 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 ANKRD55Q3KP44 614 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 FAM219AQ8IW50 185 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 ENY2Q9NPA8 101 aa13.46□□□□□ -0.25
SHMT2-206ENST00000553529 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-206ENST00000553529 CLN5O75503 358 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 ATG12O94817 140 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 NPBWR1P48145 328 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 NMSQ5H8A3 153 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 LEMD1Q68G75 181 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 LAMTOR1Q6IAA8 161 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 ZNF600Q6ZNG1 722 aa13.45□□□□□ -0.26
SHMT2-206ENST00000553529 HEYLQ9NQ87 328 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-206ENST00000553529 A0A0J9YWU9 116 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 LCE6AA0A183 80 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 RND2P52198 227 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 RBMS2Q15434 407 aaKnown RBP13.44□□□□□ -0.26
SHMT2-206ENST00000553529 PRSS54Q6PEW0 395 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 CCDC190Q86UF4 302 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 SLC24A4Q8NFF2 622 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 OR52E5Q8NH55 327 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 GALNT14Q96FL9 552 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 RBKSQ9H477 322 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 VSIRQ9H7M9 311 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 SCP2D1Q9UJQ7 156 aa13.44□□□□□ -0.26
SHMT2-206ENST00000553529 DNAH1Q9P2D7 4330 aa13.43□□□□□ -0.26
SHMT2-206ENST00000553529 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
SHMT2-206ENST00000553529 B3GALNT1O75752 331 aa13.43□□□□□ -0.26
SHMT2-206ENST00000553529 OR4X1Q8NH49 305 aa13.43□□□□□ -0.26
SHMT2-206ENST00000553529 MS4A6AQ9H2W1 248 aa13.43□□□□□ -0.26
SHMT2-206ENST00000553529 IGLC1P0CG04 106 aa13.42□□□□□ -0.26
SHMT2-206ENST00000553529 SULT1A3P0DMM9 295 aa13.42□□□□□ -0.26
SHMT2-206ENST00000553529 SULT1A4P0DMN0 295 aa13.42□□□□□ -0.26
SHMT2-206ENST00000553529 CCR6P51684 374 aa13.42□□□□□ -0.26
SHMT2-206ENST00000553529 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHMT2-206ENST00000553529 C2orf83Q53S99 150 aa13.42□□□□□ -0.26
SHMT2-206ENST00000553529 TOMM5Q8N4H5 51 aa13.42□□□□□ -0.26
SHMT2-206ENST00000553529 RPL11P62913 178 aaKnown RBP13.41□□□□□ -0.26
SHMT2-206ENST00000553529 TNFRSF9Q07011 255 aa13.41□□□□□ -0.26
SHMT2-206ENST00000553529 PMS2P11Q13670 270 aa13.41□□□□□ -0.26
SHMT2-206ENST00000553529 PLECQ15149 4684 aaKnown RBP13.41□□□□□ -0.26
SHMT2-206ENST00000553529 USF2Q15853 346 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-206ENST00000553529 BAK1Q16611 211 aa13.41□□□□□ -0.26
SHMT2-206ENST00000553529 SRRQ9GZT4 340 aa13.41□□□□□ -0.26
SHMT2-206ENST00000553529 RABL2AQ9UBK7 228 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-206ENST00000553529 RABL2BQ9UNT1 228 aa13.41□□□□□ -0.26
SHMT2-206ENST00000553529 A0A0B4J2A0 478 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 LINC00854A0A1B0GVQ3 168 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 CORTO00230 105 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 SPRY2O43597 315 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 IAPPP10997 89 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 NPY1RP25929 384 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 HTR2BP41595 481 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 DEFB131AP59861 70 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 PPP1R1AQ13522 171 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 IL22RA2Q969J5 263 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms