RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 LGI3Q8N145 548 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 DEFB125Q8N687 156 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 DUSP18Q8NEJ0 188 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 OR52E5Q8NH55 327 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 IL22RA2Q969J5 263 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 ZNF414Q96IQ9 312 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 RCHY1Q96PM5 261 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 TXN2Q99757 166 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 HEYLQ9NQ87 328 aaPredicted RBP7.67□□□□□ -1.18
LINC00517-201ENST00000553396 TENM3Q9P273 2699 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 IGHV3OR16-13A0A075B7E8 117 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 IGHV3-74A0A0B4J1X5 117 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 A0A0B4J2A0 478 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 OR11H12B2RN74 326 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 FCGR2BP31994 310 aaPredicted RBP7.66□□□□□ -1.18
LINC00517-201ENST00000553396 MLANAQ16655 118 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 TMEM128Q5BJH2 165 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 NMSQ5H8A3 153 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 SLC16A13Q7RTY0 426 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 SLC24A4Q8NFF2 622 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 OR52B4Q8NGK2 314 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 DEDD2Q8WXF8 326 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 SDHCQ99643 169 aaPredicted RBP7.66□□□□□ -1.18
LINC00517-201ENST00000553396 FNDC4Q9H6D8 234 aaPredicted RBP7.66□□□□□ -1.18
LINC00517-201ENST00000553396 ZMAT4Q9H898 229 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 SRD5A3Q9H8P0 318 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 MRPL36Q9P0J6 103 aaKnown RBP7.66□□□□□ -1.18
LINC00517-201ENST00000553396 SHPKQ9UHJ6 478 aa7.66□□□□□ -1.18
LINC00517-201ENST00000553396 C15orf62A8K5M9 175 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 HTR2BP41595 481 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 NPBWR1P48145 328 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 SRPXP78539 464 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 PPP1R1AQ13522 171 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 SMCO1Q147U7 214 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 RBMS2Q15434 407 aaKnown RBP7.65□□□□□ -1.18
LINC00517-201ENST00000553396 HAGHQ16775 308 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 BSXQ3C1V8 233 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 ANKRD55Q3KP44 614 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 PVRIGQ6DKI7 326 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 CENPSQ8N2Z9 138 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 OR1S1Q8NH92 325 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 SLC25A21Q9BQT8 299 aaPredicted RBP7.65□□□□□ -1.18
LINC00517-201ENST00000553396 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.18
LINC00517-201ENST00000553396 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 IGHV7-4-1A0A0J9YVY3 117 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 K7EMT4 169 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 SFT2D2O95562 160 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 TMEM50AO95807 157 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 TNFRSF9Q07011 255 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 C2orf83Q53S99 150 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 TOMM20LQ6UXN7 152 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 TMEM116Q8NCL8 245 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 DTD1Q8TEA8 209 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 TMEM170AQ8WVE7 144 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 OR10C1Q96KK4 312 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 RNF2Q99496 336 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 SPAG8Q99932 426 aaPredicted RBP7.64□□□□□ -1.19
LINC00517-201ENST00000553396 RHPN1-AS1Q9BWJ2 59 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 HIPK2Q9H2X6 1198 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 RBKSQ9H477 322 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 RETNQ9HD89 108 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 UBQLN2Q9UHD9 624 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 SMPXQ9UHP9 88 aa7.64□□□□□ -1.19
LINC00517-201ENST00000553396 PUS1Q9Y606 427 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC00517-201ENST00000553396 IGKV3-7A0A075B6H7 116 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 TRAV14DV4A0A0A6YYC5 116 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 IGHV3-66A0A0C4DH42 116 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 A0A1B0GU03 582 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 RPS10-NUDT3A0A1W2PQS6 291 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 RBMY1BA6NDE4 496 aaKnown RBP7.63□□□□□ -1.19
LINC00517-201ENST00000553396 RBMY1EA6NEQ0 496 aaKnown RBP7.63□□□□□ -1.19
LINC00517-201ENST00000553396 NAP1L6A6NFF2 107 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 CHEK1O14757 476 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 TSPAN4O14817 238 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 CLN5O75503 358 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 NDUFB6O95139 128 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 IFNA10P01566 189 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 RBMY1DP0C7P1 496 aaKnown RBP7.63□□□□□ -1.19
LINC00517-201ENST00000553396 IL7P13232 177 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 NPY1RP25929 384 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 RND2P52198 227 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 TIGITQ495A1 244 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 LAMTOR1Q6IAA8 161 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 ZNF600Q6ZNG1 722 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 OR4X1Q8NH49 305 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 GINS3Q9BRX5 216 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 ZFAND3Q9H8U3 227 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 HSPB7Q9UBY9 170 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 FLVCR2Q9UPI3 526 aa7.63□□□□□ -1.19
LINC00517-201ENST00000553396 DUXBA0A1W2PPF3 345 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 CENPXA8MT69 81 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 SCGB2A1O75556 95 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 APOHP02749 345 aaPredicted RBP7.62□□□□□ -1.19
LINC00517-201ENST00000553396 HOXB5P09067 269 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 BTCP35070 178 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 TFPI2P48307 235 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 PRSS54Q6PEW0 395 aa7.62□□□□□ -1.19
LINC00517-201ENST00000553396 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms