RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 C20orf24Q9BUV8 137 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 ZMAT4Q9H898 229 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 MLXQ9UH92 298 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 U3KQ87 197 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 U3KQK5 164 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 OPRK1P41145 380 aa11.56□□□□□ -0.56
SHMT2-204ENST00000553324 CD81P60033 236 aa11.56□□□□□ -0.56
SHMT2-204ENST00000553324 C2orf83Q53S99 150 aa11.56□□□□□ -0.56
SHMT2-204ENST00000553324 WDR89Q96FK6 387 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-204ENST00000553324 OR10C1Q96KK4 312 aa11.56□□□□□ -0.56
SHMT2-204ENST00000553324 TRAV30A0A087WSZ9 112 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 SFT2D2O95562 160 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 TMEM50AO95807 157 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 SLC25A6P12236 298 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 EDN2P20800 178 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 BMI1P35226 326 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 C11orf87Q6NUJ2 197 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 BTNL8Q6UX41 500 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 OR4X1Q8NH49 305 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 GINS3Q9BRX5 216 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 PRR13Q9NZ81 148 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 TMED3Q9Y3Q3 217 aa11.55□□□□□ -0.56
SHMT2-204ENST00000553324 TRAV14DV4A0A0A6YYC5 116 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 CLN5O75503 358 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 NDUFB6O95139 128 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 CD5P06127 495 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 SLC25A4P12235 298 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 IL7P13232 177 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 ZNF600Q6ZNG1 722 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 OR52B4Q8NGK2 314 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 OR1S1Q8NH92 325 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 WWC2-AS2Q96NR7 200 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 SDHCQ99643 169 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-204ENST00000553324 SPAG8Q99932 426 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-204ENST00000553324 SMPXQ9UHP9 88 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 COL7A1Q02388 2944 aa11.54□□□□□ -0.56
SHMT2-204ENST00000553324 OR11H12B2RN74 326 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 FAM90A26D6RGX4 464 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 TSPAN4O14817 238 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
SHMT2-204ENST00000553324 IFNA10P01566 189 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 CD7P09564 240 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 NPY1RP25929 384 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
SHMT2-204ENST00000553324 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
SHMT2-204ENST00000553324 LINC00854A0A1B0GVQ3 168 aa11.52□□□□□ -0.57
SHMT2-204ENST00000553324 MED6O75586 246 aa11.52□□□□□ -0.57
SHMT2-204ENST00000553324 TOMM20LQ6UXN7 152 aa11.52□□□□□ -0.57
SHMT2-204ENST00000553324 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.57
SHMT2-204ENST00000553324 FNDC4Q9H6D8 234 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-204ENST00000553324 C9orf170A2RU37 121 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
SHMT2-204ENST00000553324 PITX3O75364 302 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 NXPH3O95157 252 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
SHMT2-204ENST00000553324 MLANAQ16655 118 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 COQ8AQ8NI60 647 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 S100ZQ8WXG8 99 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 TM2D3Q9BRN9 247 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 CCDC32Q9BV29 185 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 RBKSQ9H477 322 aa11.51□□□□□ -0.57
SHMT2-204ENST00000553324 PUS1Q9Y606 427 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-204ENST00000553324 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 CHEK1O14757 476 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 IFNA4P05014 189 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 OR4E1P0C645 316 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-204ENST00000553324 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 OR1S2Q8NGQ3 325 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 RCHY1Q96PM5 261 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-204ENST00000553324 TMEM231Q9H6L2 316 aa11.5□□□□□ -0.57
SHMT2-204ENST00000553324 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
SHMT2-204ENST00000553324 A0A1W2PS18 150 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 A6NHS1 94 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 IFNA21P01568 189 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 HOXB5P09067 269 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 NPPCP23582 126 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-204ENST00000553324 RAB11AP62491 216 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 PAFAH1B2P68402 229 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 HAGHQ16775 308 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 C4orf46Q504U0 113 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 LINC00322Q6ZN03 302 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-204ENST00000553324 Q8WTZ3 238 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 NARS2Q96I59 477 aaKnown RBP11.49□□□□□ -0.57
SHMT2-204ENST00000553324 FAM110AQ9BQ89 295 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 SPATA25Q9BR10 227 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 SRD5A3Q9H8P0 318 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 FLVCR2Q9UPI3 526 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms