RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, human

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF40B-216	ENST00000552301	IFNA21	P01568	189 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	TCRB	P04435	133 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	ADM	P35318	185 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	ELL	P55199	621 aa	Predicted RBP	14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	C2orf83	Q53S99	150 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	GGNBP1	Q5YKI7	109 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	PVRIG	Q6DKI7	326 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	UNQ9165/PRO28630	Q6UXU0	137 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	NUDT15	Q9NV35	164 aa		14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	TECR	Q9NZ01	308 aa	Known RBP	14.03	□□□□□ -0.16
PRPF40B-216	ENST00000552301	TRAV6	A0A075B6T7	132 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	FAM90A26	D6RGX4	464 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	UPK1B	O75841	260 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CTSG	P08311	255 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CBLN1	P23435	193 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	TM4SF20	Q53R12	229 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	UXS1	Q8NBZ7	420 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	RNASEH2C	Q8TDP1	164 aa	Known RBP	14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CACNG8	Q8WXS5	425 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301		U3KQ87	197 aa		14.02	□□□□□ -0.17
PRPF40B-216	ENST00000552301	YIF1A	O95070	293 aa		14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ASAH1	Q13510	395 aa		14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CD300E	Q496F6	205 aa	Predicted RBP	14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ETFRF1	Q6IPR1	90 aa		14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ADAMTSL5	Q6ZMM2	481 aa		14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ENKUR	Q8TC29	256 aa		14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	DAZ1	Q9NQZ3	744 aa	Known RBP	14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	SMAD5-AS1	Q9Y6J3	95 aa		14.01	□□□□□ -0.17
PRPF40B-216	ENST00000552301	PITX3	O75364	302 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ADAP1	O75689	374 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	EDN2	P20800	178 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CD69	Q07108	199 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	DEFB114	Q30KQ6	69 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	GTSCR1	Q86UQ5	136 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CIB3	Q96Q77	187 aa	Predicted RBP	14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	FNDC4	Q9H6D8	234 aa	Predicted RBP	14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	MRPL27	Q9P0M9	148 aa	Known RBP	14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	TBC1D24	Q9ULP9	559 aa		14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	LSM4	Q9Y4Z0	139 aa	Known RBP	14	□□□□□ -0.17
PRPF40B-216	ENST00000552301	IGHV3OR16-8	A0A075B7F1	116 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	WRB	O00258	174 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	IFNA4	P05014	189 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	H2AFB2	P0C5Z0	115 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	IAPP	P10997	89 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	SLC25A4	P12235	298 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ATP5I	P56385	69 aa	Predicted RBP	13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	GUCA2B	Q16661	112 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	C11orf87	Q6NUJ2	197 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	BTNL8	Q6UX41	500 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	OR52B4	Q8NGK2	314 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	OR4X1	Q8NH49	305 aa		13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	PAIP2B	Q9ULR5	123 aa	Known RBP	13.99	□□□□□ -0.17
PRPF40B-216	ENST00000552301	IZUMO1R	A6ND01	250 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	C15orf62	A8K5M9	175 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	CLN5	O75503	358 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	RAB11A	P62491	216 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ZNF600	Q6ZNG1	722 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	MITD1	Q8WV92	249 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	GINS3	Q9BRX5	216 aa		13.98	□□□□□ -0.17
PRPF40B-216	ENST00000552301	TRAV30	A0A087WSZ9	112 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301		K7EMT4	169 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ZNF207	O43670	478 aa	Known RBP	13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	SYNGR2	O43760	224 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	TMEM50A	O95807	157 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	RND2	P52198	227 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	DEFA1	P59665	94 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	DEFA3	P59666	94 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	RPP30	P78346	268 aa	Known RBP	13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	SLC16A13	Q7RTY0	426 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	B9D2	Q9BPU9	175 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	MAGT1	Q9H0U3	335 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	MLX	Q9UH92	298 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	SELENOK	Q9Y6D0	94 aa		13.97	□□□□□ -0.17
PRPF40B-216	ENST00000552301	C8orf88	P0DMB2	117 aa		13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	BMI1	P35226	326 aa		13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	NKX2-1	P43699	371 aa	Predicted RBP	13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	MLANA	Q16655	118 aa		13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	TMEM61	Q8N0U2	210 aa		13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	ZNF431	Q8TF32	576 aa	Predicted RBP	13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	TMEM170A	Q8WVE7	144 aa		13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	MRPL36	Q9P0J6	103 aa	Known RBP	13.96	□□□□□ -0.17
PRPF40B-216	ENST00000552301	IAH1	Q2TAA2	248 aa	Predicted RBP	13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	LAMTOR1	Q6IAA8	161 aa		13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	PRSS54	Q6PEW0	395 aa		13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	OR1S2	Q8NGQ3	325 aa		13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	WDR89	Q96FK6	387 aa	Predicted RBP	13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	ACY3	Q96HD9	319 aa		13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	SLC35E1	Q96K37	410 aa		13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	SEC22C	Q9BRL7	303 aa		13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PRPF40B-216	ENST00000552301	TRAV25	A0A0B4J276	109 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	MPTX1	A8MV57	137 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	SCAF4	O95104	1147 aa	Known RBP	13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	SCGB1D2	O95969	90 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	CD81	P60033	236 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	TOMM20L	Q6UXN7	152 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	TMEM116	Q8NCL8	245 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	OR10C1	Q96KK4	312 aa		13.94	□□□□□ -0.18
PRPF40B-216	ENST00000552301	GSKIP	Q9P0R6	139 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms