RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TMEM68Q96MH6 324 aa6.51□□□□□ -1.37
CHPT1-208ENST00000552215 OR4F4Q96R69 305 aa6.51□□□□□ -1.37
CHPT1-208ENST00000552215 ASCL2Q99929 193 aa6.51□□□□□ -1.37
CHPT1-208ENST00000552215 PPP1R14DQ9NXH3 145 aa6.51□□□□□ -1.37
CHPT1-208ENST00000552215 CUBNO60494 3623 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 SLC35B1P78383 322 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 C16orf82Q7Z2V1 217 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 OR51G1Q8NGK1 321 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 NPVFQ9HCQ7 196 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
CHPT1-208ENST00000552215 TRAV5A0A0B4J249 113 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 RPS10-NUDT3A0A1W2PQS6 291 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 F8W036 122 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 NDUFB8O95169 186 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 MGST1P10620 155 aaKnown RBP6.5□□□□□ -1.37
CHPT1-208ENST00000552215 BLOC1S1P78537 153 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 NDUFA5Q16718 116 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 KLK15Q9H2R5 256 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 C21orf62Q9NYP8 219 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 SSBP2P81877 361 aaPredicted RBP6.5□□□□□ -1.37
CHPT1-208ENST00000552215 RPEL1Q2QD12 228 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 TMEM30BQ3MIR4 351 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 OR11H6Q8NGC7 330 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 ZFHX3Q15911 3703 aa6.5□□□□□ -1.37
CHPT1-208ENST00000552215 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 MAP1LC3B2A6NCE7 125 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 RPL15P61313 204 aaKnown RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 PRCDQ00LT1 54 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 LOXL1Q08397 574 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 ACOT6Q3I5F7 207 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TEX45Q8NA69 505 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 STXBP6Q8NFX7 210 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 Q8WTZ3 238 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 IL22RA2Q969J5 263 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 GON7Q9BXV9 100 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TCRBV4S1A1TA0A5B7 111 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 DNASE2O00115 360 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TCTEX1D1Q8N7M0 179 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 LY6G5BQ8NDX9 201 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TMEM167AQ8TBQ9 72 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 HSPB7Q9UBY9 170 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 AP4M1O00189 453 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 MFAP4P55083 255 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 HAPLN4Q86UW8 402 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 STPG3Q8N7X2 389 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 SCARB1Q8WTV0 552 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 GNPNAT1Q96EK6 184 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 SMIM8Q96KF7 97 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 ACTR3CQ9C0K3 210 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 RPRMQ9NS64 109 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 BET1LQ9NYM9 111 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 TBL2Q9Y4P3 447 aaKnown RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 NBEAL1Q6ZS30 2694 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 HMSDA8MTL9 139 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 RBFOX2O43251 390 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 COMPP49747 757 aaPredicted RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 UBE2L3P68036 154 aaKnown RBP6.49□□□□□ -1.37
CHPT1-208ENST00000552215 OR5AU1Q8NGC0 362 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 SLA2Q9H6Q3 261 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 MED9Q9NWA0 146 aa6.49□□□□□ -1.37
CHPT1-208ENST00000552215 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 B3GALNT1O75752 331 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 PF4P02776 101 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 KLHL30-AS1Q8NEE0 82 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 A0A1B0GWJ7 208 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 TAAR5O14804 337 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 MMP9P14780 707 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 PAX9P55771 341 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 C10orf113Q5VZT2 155 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 SPATA31B1PQ5VZV4 182 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 ST6GALNAC6Q969X2 333 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 URGCP-MRPS24S4R325 110 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 SCO1O75880 301 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 GATA3P23771 443 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 ARL3P36405 182 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 ETFRF1Q6IPR1 90 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 TIMM9Q9Y5J7 89 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 NOTCH1P46531 2555 aa6.48□□□□□ -1.37
CHPT1-208ENST00000552215 PAGE4O60829 102 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 RPLP1P05386 114 aaKnown RBP6.47□□□□□ -1.37
CHPT1-208ENST00000552215 ZNF562Q6V9R5 426 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 ZNF767PQ75MW2 155 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 NHLRC2Q8NBF2 726 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 FAM110DQ8TAY7 271 aaPredicted RBP6.47□□□□□ -1.37
CHPT1-208ENST00000552215 GLMPQ8WWB7 406 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 IGHV7-81A0A0B4J1V7 117 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 PYYP10082 97 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 SYNJ2BPP57105 145 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
CHPT1-208ENST00000552215 LINC00311Q8N616 119 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 Q8N9W7 124 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 DYNLRB2Q8TF09 96 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 GATAD1Q8WUU5 269 aa6.47□□□□□ -1.37
CHPT1-208ENST00000552215 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms