RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PALMDQ9NP74 551 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 SIGLEC8Q9NYZ4 499 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 RPS10-NUDT3A0A1W2PQS6 291 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 SYNGR2O43760 224 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 LY86O95711 162 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 IGHV3-48P01763 117 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 IL5P05113 134 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 CSN3P07498 182 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 CTSGP08311 255 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 NPY1RP25929 384 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 ID3Q02535 119 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 MLANAQ16655 118 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 IL34Q6ZMJ4 242 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 NRARPQ7Z6K4 114 aa8.1□□□□□ -1.11
PTCH1-225ENST00000551845 C12orf45Q8N5I9 185 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-225ENST00000551845 RNASEH2CQ8TDP1 164 aaKnown RBP8.1□□□□□ -1.11
PTCH1-225ENST00000551845 CIB3Q96Q77 187 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-225ENST00000551845 GPN1Q9HCN4 374 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-225ENST00000551845 TRAV30A0A087WSZ9 112 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 IGHV3-35A0A0C4DH35 117 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 INMT-MINDY4F8WBC2 141 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 WRBO00258 174 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 NDUFA4O00483 81 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 SCGB2A1O75556 95 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 TMEM50AO95807 157 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 IFNA4P05014 189 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 SLC25A4P12235 298 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 NKX2-1P43699 371 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-225ENST00000551845 RAB11AP62491 216 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 RELQ04864 619 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-225ENST00000551845 DCTN2Q13561 401 aaKnown RBP8.09□□□□□ -1.11
PTCH1-225ENST00000551845 IAH1Q2TAA2 248 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-225ENST00000551845 DEFB121Q5J5C9 76 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 SEC22CQ9BRL7 303 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 CHRDL1Q9BU40 450 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 MAGT1Q9H0U3 335 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 AURKAIP1Q9NWT8 199 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-225ENST00000551845 GSKIPQ9P0R6 139 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 ZNF256Q9Y2P7 627 aaPredicted RBP8.09□□□□□ -1.11
PTCH1-225ENST00000551845 UFC1Q9Y3C8 167 aa8.09□□□□□ -1.11
PTCH1-225ENST00000551845 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 C2orf70A6NJV1 201 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 MPTX1A8MV57 137 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 FAM25EA8MYX2 175 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 PRAF2O60831 178 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 CLN5O75503 358 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 YIF1AO95070 293 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 IGLV1-51P01701 117 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 FOLR2P14207 255 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 CBLN1P23435 193 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 ADMP35318 185 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 ELLP55199 621 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 C11orf87Q6NUJ2 197 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 OR4X1Q8NH49 305 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 MARC2Q969Z3 335 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 OR10C1Q96KK4 312 aa8.08□□□□□ -1.12
PTCH1-225ENST00000551845 ZNF436Q9C0F3 470 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 FNDC4Q9H6D8 234 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 TECRQ9NZ01 308 aaKnown RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 MRPL27Q9P0M9 148 aaKnown RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 PAIP2BQ9ULR5 123 aaKnown RBP8.08□□□□□ -1.12
PTCH1-225ENST00000551845 C5orf51A6NDU8 294 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 K7EMT4 169 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 IAPPP10997 89 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 SPNP16150 400 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 GPX4P36969 197 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-225ENST00000551845 POLR2GP62487 172 aaKnown RBP eCLIP8.07□□□□□ -1.12
PTCH1-225ENST00000551845 CD69Q07108 199 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 TM4SF20Q53R12 229 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 UNQ9165/PRO28630Q6UXU0 137 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 ZBTB8BQ8NAP8 495 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-225ENST00000551845 OR4D5Q8NGN0 318 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 DYNLRB2Q8TF09 96 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 CACNG8Q8WXS5 425 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 MARVELD1Q9BSK0 173 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
PTCH1-225ENST00000551845 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 SNRPGP15A8MWD9 76 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 A8MWP6 167 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 SCGB1D2O95969 90 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 GP9P14770 177 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 DEFB114Q30KQ6 69 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 SPANXN5Q5MJ07 72 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 LCN12Q6JVE5 192 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 PRSS54Q6PEW0 395 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 GSG1LQ6UXU4 331 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 TMEM116Q8NCL8 245 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 TMEM170AQ8WVE7 144 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 TMEM190Q8WZ59 177 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 SMIM8Q96KF7 97 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 C2orf50Q96LR7 162 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 PSENENQ9NZ42 101 aa8.06□□□□□ -1.12
PTCH1-225ENST00000551845 STRAPQ9Y3F4 350 aaKnown RBP8.06□□□□□ -1.12
PTCH1-225ENST00000551845 TRAV14DV4A0A0A6YYC5 116 aa8.05□□□□□ -1.12
PTCH1-225ENST00000551845 TMEM213A2RRL7 107 aa8.05□□□□□ -1.12
PTCH1-225ENST00000551845 K7EIL1 84 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms