RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 C19orf35Q6ZS72 473 aa19.18■□□□□ 0.66
NPAS3-211ENST00000551634 OR10W1Q8NGF6 305 aa19.18■□□□□ 0.66
NPAS3-211ENST00000551634 CASP6P55212 293 aa19.18■□□□□ 0.66
NPAS3-211ENST00000551634 OR1L4Q8NGR5 311 aa19.18■□□□□ 0.66
NPAS3-211ENST00000551634 CADP27708 2225 aa19.18■□□□□ 0.66
NPAS3-211ENST00000551634 A0A1W2PN81 502 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 PRRX1P54821 245 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 RPL8P62917 257 aaKnown RBP19.17■□□□□ 0.66
NPAS3-211ENST00000551634 HARBI1Q96MB7 349 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 PMCHP20382 165 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 TMEM177Q53S58 311 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 MBD6Q96DN6 1003 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 GAL3ST2Q9H3Q3 398 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 AMMECR1Q9Y4X0 333 aaPredicted RBP19.17■□□□□ 0.66
NPAS3-211ENST00000551634 ZZEF1O43149 2961 aa19.17■□□□□ 0.66
NPAS3-211ENST00000551634 USF1P22415 310 aaPredicted RBP19.16■□□□□ 0.66
NPAS3-211ENST00000551634 RAI1Q7Z5J4 1906 aaPredicted RBP19.16■□□□□ 0.66
NPAS3-211ENST00000551634 OR5AN1Q8NGI8 311 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 RND1Q92730 232 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 CHRDL1Q9BU40 450 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 WT1P19544 449 aaPredicted RBP19.16■□□□□ 0.66
NPAS3-211ENST00000551634 MORN5Q5VZ52 161 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 NIT1Q86X76 327 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 OR4A5Q8NH83 315 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 OR2T6Q8NHC8 308 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 MRPL20Q9BYC9 149 aaKnown RBP19.16■□□□□ 0.66
NPAS3-211ENST00000551634 LPAR2Q9HBW0 351 aa19.16■□□□□ 0.66
NPAS3-211ENST00000551634 TRAV5A0A0B4J249 113 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 MEF2CQ06413 473 aaPredicted RBP19.15■□□□□ 0.66
NPAS3-211ENST00000551634 TSKUQ8WUA8 353 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 GOLT1BQ9Y3E0 138 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 H0YJW9 148 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 COX7A2P2O60397 106 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 SPATA45Q537H7 98 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 GRAMD2BQ96HH9 432 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 PAXXQ9BUH6 204 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 ASCL3Q9NQ33 180 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 ZNRD1Q9P1U0 126 aa19.15■□□□□ 0.66
NPAS3-211ENST00000551634 NBEAQ8NFP9 2946 aa19.14■□□□□ 0.66
NPAS3-211ENST00000551634 BOD1L1Q8NFC6 3051 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 C3orf79P0CE67 100 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 VSTM2AQ8TAG5 236 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 TMEM167AQ8TBQ9 72 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 ZNF430Q9H8G1 570 aaPredicted RBP19.14■□□□□ 0.65
NPAS3-211ENST00000551634 UQCR10Q9UDW1 63 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 AKAP13Q12802 2813 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 BPIFB3P59826 476 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 COL5A1-AS1Q5SY13 56 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 C10orf113Q5VZT2 155 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 ZNF355PQ9NSJ1 428 aa19.14■□□□□ 0.65
NPAS3-211ENST00000551634 NKX6-3A6NJ46 265 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 PEX7O00628 323 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 C18orf32Q8TCD1 76 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 FAM168AQ92567 244 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 FLYWCH2Q96CP2 140 aaKnown RBP19.13■□□□□ 0.65
NPAS3-211ENST00000551634 YLPM1P49750 1951 aaKnown RBP19.13■□□□□ 0.65
NPAS3-211ENST00000551634 DPRXA6NFQ7 191 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 CHRNB4P30926 498 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 SUB1P53999 127 aaKnown RBP eCLIP19.13■□□□□ 0.65
NPAS3-211ENST00000551634 ZNF329Q86UD4 541 aa19.13■□□□□ 0.65
NPAS3-211ENST00000551634 TCRBV4S1A1TA0A5B7 111 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 CEACAM4O75871 244 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 SLAQ13239 276 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 TBR1Q16650 682 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 BORCS7Q96B45 105 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 LINC00479Q96M42 142 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 FAM215AQ9Y5M1 114 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 A6NNC1 897 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 CA1P00915 261 aaPredicted RBP19.12■□□□□ 0.65
NPAS3-211ENST00000551634 ZADH2Q8N4Q0 377 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 THAP8Q8NA92 274 aa19.12■□□□□ 0.65
NPAS3-211ENST00000551634 SNRNP40Q96DI7 357 aaKnown RBP19.12■□□□□ 0.65
NPAS3-211ENST00000551634 FAM71F2Q6NXP2 309 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 NHLRC2Q8NBF2 726 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 OR4C13Q8NGP0 309 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 CHD8Q9HCK8 2581 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 LINC00614P0C842 121 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 IGLC2P0DOY2 106 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 IGLC3P0DOY3 106 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 DEFB109BQ30KR1 87 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 KLHDC1Q8N7A1 406 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 PRSS33Q8NF86 280 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 NUDT10Q8NFP7 164 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 NUDT11Q96G61 164 aa19.11■□□□□ 0.65
NPAS3-211ENST00000551634 SSBP3Q9BWW4 388 aaPredicted RBP19.11■□□□□ 0.65
NPAS3-211ENST00000551634 PYYP10082 97 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 TCF15Q12870 199 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 KLF5Q13887 457 aaPredicted RBP19.1■□□□□ 0.65
NPAS3-211ENST00000551634 PATE2Q6UY27 113 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 PDPNQ86YL7 162 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 SPACA3Q8IXA5 215 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 DYSFO75923 2080 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 MFAP2P55001 183 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 NUP35Q8NFH5 326 aa19.1■□□□□ 0.65
NPAS3-211ENST00000551634 FNDC4Q9H6D8 234 aaPredicted RBP19.1■□□□□ 0.65
NPAS3-211ENST00000551634 DSPP15924 2871 aaKnown RBP19.1■□□□□ 0.65
NPAS3-211ENST00000551634 BATFQ16520 125 aa19.09■□□□□ 0.65
NPAS3-211ENST00000551634 C1orf185Q5T7R7 199 aa19.09■□□□□ 0.65
NPAS3-211ENST00000551634 PIP4P1Q86T03 277 aa19.09■□□□□ 0.65
NPAS3-211ENST00000551634 NPIPB3Q92617 1050 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms