RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 DEFB125Q8N687 156 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 SPAG8Q99932 426 aaPredicted RBP14.24□□□□□ -0.13
DDX54-208ENST00000551344 SMPXQ9UHP9 88 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 CEBPZOSA8MTT3 80 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 TSPAN4O14817 238 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 C2orf83Q53S99 150 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 NMSQ5H8A3 153 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 LYZL2Q7Z4W2 148 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 TMED4Q7Z7H5 227 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 SPATA25Q9BR10 227 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 HIPK2Q9H2X6 1198 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 PRR13Q9NZ81 148 aa14.23□□□□□ -0.13
DDX54-208ENST00000551344 TRAV14DV4A0A0A6YYC5 116 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 ZNF207O43670 478 aaKnown RBP14.22□□□□□ -0.13
DDX54-208ENST00000551344 OPRK1P41145 380 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 SMCO1Q147U7 214 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 NOXA1Q86UR1 476 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 TMEM116Q8NCL8 245 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 OR4X1Q8NH49 305 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 FNDC4Q9H6D8 234 aaPredicted RBP14.22□□□□□ -0.13
DDX54-208ENST00000551344 SRD5A3Q9H8P0 318 aa14.22□□□□□ -0.13
DDX54-208ENST00000551344 HUWE1Q7Z6Z7 4374 aaKnown RBP14.21□□□□□ -0.13
DDX54-208ENST00000551344 IGHV7-4-1A0A0J9YVY3 117 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 A0A1B0GU03 582 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 DUXBA0A1W2PPF3 345 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 RPS10-NUDT3A0A1W2PQS6 291 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 CLN5O75503 358 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 INPP1P49441 399 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 MLANAQ16655 118 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 TOMM20LQ6UXN7 152 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 ZNF600Q6ZNG1 722 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 RNASEH2CQ8TDP1 164 aaKnown RBP14.21□□□□□ -0.13
DDX54-208ENST00000551344 GINS3Q9BRX5 216 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 RHPN1-AS1Q9BWJ2 59 aa14.21□□□□□ -0.13
DDX54-208ENST00000551344 TRAV30A0A087WSZ9 112 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 RBMY1BA6NDE4 496 aaKnown RBP14.2□□□□□ -0.14
DDX54-208ENST00000551344 RBMY1EA6NEQ0 496 aaKnown RBP14.2□□□□□ -0.14
DDX54-208ENST00000551344 NAP1L6A6NFF2 107 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 CHEK1O14757 476 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 RBMY1DP0C7P1 496 aaKnown RBP14.2□□□□□ -0.14
DDX54-208ENST00000551344 TNFRSF9Q07011 255 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 RBMS2Q15434 407 aaKnown RBP14.2□□□□□ -0.14
DDX54-208ENST00000551344 BAK1Q16611 211 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 TRIQKQ629K1 86 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 LRTM2Q8N967 370 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 SLC24A4Q8NFF2 622 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 WFDC10AQ9H1F0 79 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 HSPB7Q9UBY9 170 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 U3KQ87 197 aa14.2□□□□□ -0.14
DDX54-208ENST00000551344 CD5P06127 495 aa14.19□□□□□ -0.14
DDX54-208ENST00000551344 VAMP1P23763 118 aa14.19□□□□□ -0.14
DDX54-208ENST00000551344 BMI1P35226 326 aa14.19□□□□□ -0.14
DDX54-208ENST00000551344 CITED4Q96RK1 184 aa14.19□□□□□ -0.14
DDX54-208ENST00000551344 PUS1Q9Y606 427 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDX54-208ENST00000551344 C3orf84H3BNL1 204 aa14.18□□□□□ -0.14
DDX54-208ENST00000551344 SLC25A4P12235 298 aa14.18□□□□□ -0.14
DDX54-208ENST00000551344 ATP5IP56385 69 aaPredicted RBP14.18□□□□□ -0.14
DDX54-208ENST00000551344 ETFRF1Q6IPR1 90 aa14.18□□□□□ -0.14
DDX54-208ENST00000551344 CENPSQ8N2Z9 138 aa14.18□□□□□ -0.14
DDX54-208ENST00000551344 RNF2Q99496 336 aa14.18□□□□□ -0.14
DDX54-208ENST00000551344 MRPL36Q9P0J6 103 aaKnown RBP14.18□□□□□ -0.14
DDX54-208ENST00000551344 OR4C46A6NHA9 309 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 NXPH3O95157 252 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 SFT2D2O95562 160 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 SLC25A6P12236 298 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 NPY1RP25929 384 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 UBE2MP61081 183 aaKnown RBP14.17□□□□□ -0.14
DDX54-208ENST00000551344 OR1S1Q8NH92 325 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 SDHCQ99643 169 aaPredicted RBP14.17□□□□□ -0.14
DDX54-208ENST00000551344 FAM110AQ9BQ89 295 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 ZFAND3Q9H8U3 227 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 TMED3Q9Y3Q3 217 aa14.17□□□□□ -0.14
DDX54-208ENST00000551344 CENPXA8MT69 81 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 PITX3O75364 302 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 IFNA10P01566 189 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 PPP1R1AQ13522 171 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 PRSS54Q6PEW0 395 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 TMEM170AQ8WVE7 144 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 C7orf50Q9BRJ6 194 aaKnown RBP14.16□□□□□ -0.14
DDX54-208ENST00000551344 RBKSQ9H477 322 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 VSIRQ9H7M9 311 aa14.16□□□□□ -0.14
DDX54-208ENST00000551344 LOC102724200A0A096LPH7 203 aaPredicted RBP14.15□□□□□ -0.14
DDX54-208ENST00000551344 IGHV3-49A0A0A0MS15 119 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 NDUFB6O95139 128 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 IGKV1-17P01599 117 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 NPPCP23582 126 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 CMC4P56277 68 aaPredicted RBP14.15□□□□□ -0.14
DDX54-208ENST00000551344 FAM90A2PQ658T7 463 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 OR1S2Q8NGQ3 325 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 MUC7Q8TAX7 377 aa14.15□□□□□ -0.14
DDX54-208ENST00000551344 A0A1W2PS18 150 aa14.14□□□□□ -0.15
DDX54-208ENST00000551344 FAM90A26D6RGX4 464 aa14.14□□□□□ -0.15
DDX54-208ENST00000551344 RND2P52198 227 aa14.14□□□□□ -0.15
DDX54-208ENST00000551344 PAFAH1B2P68402 229 aa14.14□□□□□ -0.15
DDX54-208ENST00000551344 GGTLC1Q9BX51 225 aa14.14□□□□□ -0.15
DDX54-208ENST00000551344 TMEM231Q9H6L2 316 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms