RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CTSGP08311 255 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 HOXB5P09067 269 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 CBLN1P23435 193 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 ADMP35318 185 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 RNASEH2CQ8TDP1 164 aaKnown RBP19.68■□□□□ 0.74
CPSF6-205ENST00000550075 RBKSQ9H477 322 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 DAZ1Q9NQZ3 744 aaKnown RBP19.68■□□□□ 0.74
CPSF6-205ENST00000550075 LSM4Q9Y4Z0 139 aaKnown RBP19.68■□□□□ 0.74
CPSF6-205ENST00000550075 SMAD5-AS1Q9Y6J3 95 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 MED6O75586 246 aa19.67■□□□□ 0.74
CPSF6-205ENST00000550075 TCRBP04435 133 aa19.67■□□□□ 0.74
CPSF6-205ENST00000550075 ADAMTSL5Q6ZMM2 481 aa19.67■□□□□ 0.74
CPSF6-205ENST00000550075 U3KQ87 197 aa19.67■□□□□ 0.74
CPSF6-205ENST00000550075 PITX3O75364 302 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 IFNA10P01566 189 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 IFNA21P01568 189 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 ATP5IP56385 69 aaPredicted RBP19.66■□□□□ 0.74
CPSF6-205ENST00000550075 TM4SF20Q53R12 229 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 GGNBP1Q5YKI7 109 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 GTSCR1Q86UQ5 136 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 UXS1Q8NBZ7 420 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 CACNG8Q8WXS5 425 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 C20orf24Q9BUV8 137 aa19.66■□□□□ 0.74
CPSF6-205ENST00000550075 MRPL27Q9P0M9 148 aaKnown RBP19.66■□□□□ 0.74
CPSF6-205ENST00000550075 FAM240BA0A1B0GVZ2 78 aa19.65■□□□□ 0.74
CPSF6-205ENST00000550075 CD69Q07108 199 aa19.65■□□□□ 0.74
CPSF6-205ENST00000550075 ASAH1Q13510 395 aa19.65■□□□□ 0.74
CPSF6-205ENST00000550075 DEFB114Q30KQ6 69 aa19.65■□□□□ 0.74
CPSF6-205ENST00000550075 CD300EQ496F6 205 aaPredicted RBP19.65■□□□□ 0.74
CPSF6-205ENST00000550075 B9D2Q9BPU9 175 aa19.65■□□□□ 0.74
CPSF6-205ENST00000550075 NUDT15Q9NV35 164 aa19.65■□□□□ 0.74
CPSF6-205ENST00000550075 UPK1BO75841 260 aa19.64■□□□□ 0.73
CPSF6-205ENST00000550075 SLC25A4P12235 298 aa19.64■□□□□ 0.73
CPSF6-205ENST00000550075 ETFRF1Q6IPR1 90 aa19.64■□□□□ 0.73
CPSF6-205ENST00000550075 FNDC4Q9H6D8 234 aaPredicted RBP19.64■□□□□ 0.73
CPSF6-205ENST00000550075 K7EMT4 169 aa19.63■□□□□ 0.73
CPSF6-205ENST00000550075 YIF1AO95070 293 aa19.63■□□□□ 0.73
CPSF6-205ENST00000550075 EDN2P20800 178 aa19.63■□□□□ 0.73
CPSF6-205ENST00000550075 OR4X1Q8NH49 305 aa19.63■□□□□ 0.73
CPSF6-205ENST00000550075 CIB3Q96Q77 187 aaPredicted RBP19.63■□□□□ 0.73
CPSF6-205ENST00000550075 TBC1D24Q9ULP9 559 aa19.63■□□□□ 0.73
CPSF6-205ENST00000550075 TRAV6A0A075B6T7 132 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 C15orf62A8K5M9 175 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 CLN5O75503 358 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 ADAP1O75689 374 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 C8orf88P0DMB2 117 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 BTNL8Q6UX41 500 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 GINS3Q9BRX5 216 aa19.62■□□□□ 0.73
CPSF6-205ENST00000550075 TRAV30A0A087WSZ9 112 aa19.61■□□□□ 0.73
CPSF6-205ENST00000550075 IZUMO1RA6ND01 250 aa19.61■□□□□ 0.73
CPSF6-205ENST00000550075 ZNF600Q6ZNG1 722 aa19.61■□□□□ 0.73
CPSF6-205ENST00000550075 MITD1Q8WV92 249 aa19.61■□□□□ 0.73
CPSF6-205ENST00000550075 MLXQ9UH92 298 aa19.61■□□□□ 0.73
CPSF6-205ENST00000550075 TMEM50AO95807 157 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 IFNA4P05014 189 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 H2AFB2P0C5Z0 115 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 RPP30P78346 268 aaKnown RBP19.6■□□□□ 0.73
CPSF6-205ENST00000550075 GUCA2BQ16661 112 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 C11orf87Q6NUJ2 197 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 ENKURQ8TC29 256 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 TMEM170AQ8WVE7 144 aa19.6■□□□□ 0.73
CPSF6-205ENST00000550075 TRAV25A0A0B4J276 109 aa19.59■□□□□ 0.73
CPSF6-205ENST00000550075 SYNGR2O43760 224 aa19.59■□□□□ 0.73
CPSF6-205ENST00000550075 IAPPP10997 89 aa19.59■□□□□ 0.73
CPSF6-205ENST00000550075 RAB11AP62491 216 aa19.59■□□□□ 0.73
CPSF6-205ENST00000550075 IGHV3OR16-8A0A075B7F1 116 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 WRBO00258 174 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 BMI1P35226 326 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 RND2P52198 227 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 RBPMS2Q6ZRY4 209 aaKnown RBP19.58■□□□□ 0.72
CPSF6-205ENST00000550075 TMEM61Q8N0U2 210 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 OR52B4Q8NGK2 314 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 OR10C1Q96KK4 312 aa19.58■□□□□ 0.72
CPSF6-205ENST00000550075 ZNF207O43670 478 aaKnown RBP19.57■□□□□ 0.72
CPSF6-205ENST00000550075 MLANAQ16655 118 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 LAMTOR1Q6IAA8 161 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 PRSS54Q6PEW0 395 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 SLC16A13Q7RTY0 426 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 TMEM116Q8NCL8 245 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 OR1S2Q8NGQ3 325 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 WDR89Q96FK6 387 aaPredicted RBP19.57■□□□□ 0.72
CPSF6-205ENST00000550075 MAGT1Q9H0U3 335 aa19.57■□□□□ 0.72
CPSF6-205ENST00000550075 MRPL36Q9P0J6 103 aaKnown RBP19.57■□□□□ 0.72
CPSF6-205ENST00000550075 PUS1Q9Y606 427 aaKnown RBP eCLIP19.57■□□□□ 0.72
CPSF6-205ENST00000550075 NKX2-1P43699 371 aaPredicted RBP19.56■□□□□ 0.72
CPSF6-205ENST00000550075 DEFA1P59665 94 aa19.56■□□□□ 0.72
CPSF6-205ENST00000550075 DEFA3P59666 94 aa19.56■□□□□ 0.72
CPSF6-205ENST00000550075 CD81P60033 236 aa19.56■□□□□ 0.72
CPSF6-205ENST00000550075 TOMM20LQ6UXN7 152 aa19.56■□□□□ 0.72
CPSF6-205ENST00000550075 Q8N1Y9 231 aa19.56■□□□□ 0.72
CPSF6-205ENST00000550075 ZNF431Q8TF32 576 aaPredicted RBP19.56■□□□□ 0.72
CPSF6-205ENST00000550075 PAIP2BQ9ULR5 123 aaKnown RBP19.56■□□□□ 0.72
CPSF6-205ENST00000550075 IGHV7-4-1A0A0J9YVY3 117 aa19.55■□□□□ 0.72
CPSF6-205ENST00000550075 ZNF785A8K8V0 405 aa19.55■□□□□ 0.72
CPSF6-205ENST00000550075 IAH1Q2TAA2 248 aaPredicted RBP19.55■□□□□ 0.72
CPSF6-205ENST00000550075 ACY3Q96HD9 319 aa19.55■□□□□ 0.72
CPSF6-205ENST00000550075 SLC35E1Q96K37 410 aa19.55■□□□□ 0.72
CPSF6-205ENST00000550075 SMPXQ9UHP9 88 aa19.55■□□□□ 0.72
CPSF6-205ENST00000550075 TRAV14DV4A0A0A6YYC5 116 aa19.54■□□□□ 0.72
CPSF6-205ENST00000550075 MPTX1A8MV57 137 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms