RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MIFP14174 115 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 P2RY1P47900 373 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 UCP3P55916 312 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-205ENST00000550013 CLEC5AQ9NY25 188 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 TRAV10A0A0B4J240 114 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 ZNF705EA8MWA4 302 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-205ENST00000550013 M0QYG6 137 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 IFNA17P01571 189 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 SPP1P10451 314 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 PI3P19957 117 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 MLANAQ16655 118 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 PVRIGQ6DKI7 326 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 MORN3Q6PF18 240 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-205ENST00000550013 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 GRAMD2BQ96HH9 432 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 METTL26Q96S19 204 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 CELA1Q9UNI1 258 aa11.14□□□□□ -0.63
RAB5C-205ENST00000550013 A0A1W2PS18 150 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 CLN5O75503 358 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 CRYBB3P26998 211 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 RCVRNP35243 200 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 ETV6P41212 452 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 KCTD21Q4G0X4 260 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 TMEM41BQ5BJD5 291 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 TP53RKQ96S44 253 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 SCPEP1Q9HB40 452 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 COMMD3Q9UBI1 195 aa11.13□□□□□ -0.63
RAB5C-205ENST00000550013 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 PKD1P98161 4303 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 PGAM2P15259 253 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 OPRK1P41145 380 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-205ENST00000550013 AKR1C2P52895 323 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 RND3P61587 244 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 TIGITQ495A1 244 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 CSNK1G2-AS1Q8NCQ2 148 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 TMEM230Q96A57 120 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 YIPF6Q96EC8 236 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 TBC1D24Q9ULP9 559 aa11.12□□□□□ -0.63
RAB5C-205ENST00000550013 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 CORTO00230 105 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 IGKV1-17P01599 117 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 APOA1P02647 267 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
RAB5C-205ENST00000550013 PIGPP57054 158 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
RAB5C-205ENST00000550013 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 OR4X1Q8NH49 305 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
RAB5C-205ENST00000550013 A0A0G2JRQ6 117 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 DHRS2Q13268 280 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 C12orf74Q32Q52 190 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 SP6Q3SY56 376 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 CENPSQ8N2Z9 138 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 NARS2Q96I59 477 aaKnown RBP11.1□□□□□ -0.63
RAB5C-205ENST00000550013 RAB40CQ96S21 281 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 PDCD10Q9BUL8 212 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 U3KQE9 123 aa11.1□□□□□ -0.63
RAB5C-205ENST00000550013 MUC4Q99102 2169 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 DEFB131BA0A096LNP1 70 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 AMBPP02760 352 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 ELK1P19419 428 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 BSXQ3C1V8 233 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 LHFPL1Q86WI0 220 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 ZNF486Q96H40 463 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-205ENST00000550013 ENY2Q9NPA8 101 aa11.09□□□□□ -0.63
RAB5C-205ENST00000550013 HELTA6NFD8 242 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 HPGDSO60760 199 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 RPL5P46777 297 aaKnown RBP11.08□□□□□ -0.64
RAB5C-205ENST00000550013 NCS1P62166 190 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 TRIM16LQ309B1 348 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 C16orf54Q6UWD8 224 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 Q6ZRM9 215 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
RAB5C-205ENST00000550013 M0R2N4 97 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 RTL8CO15255 209 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 SCGB2A1O75556 95 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 ATG12O94817 140 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 CD3DP04234 171 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
RAB5C-205ENST00000550013 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 RNASE11Q8TAA1 199 aaKnown RBP11.07□□□□□ -0.64
RAB5C-205ENST00000550013 KLK11Q9UBX7 282 aa11.07□□□□□ -0.64
RAB5C-205ENST00000550013 TRAV30A0A087WSZ9 112 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 HNRNPCP07910 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
RAB5C-205ENST00000550013 UCP1P25874 307 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 EIF2B2P49770 351 aaKnown RBP11.06□□□□□ -0.64
RAB5C-205ENST00000550013 RND2P52198 227 aa11.06□□□□□ -0.64
RAB5C-205ENST00000550013 PRSS54Q6PEW0 395 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms