RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
SCAF11-209ENST00000547018 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
SCAF11-209ENST00000547018 RANP62826 216 aaKnown RBP10.25□□□□□ -0.77
SCAF11-209ENST00000547018 FXYD3Q14802 87 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 PRB1P04280 392 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 SFTPCP11686 197 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 GPR6P46095 362 aaPredicted RBP10.24□□□□□ -0.77
SCAF11-209ENST00000547018 ASCL2Q99929 193 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 FKBP11Q9NYL4 201 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 MTORP42345 2549 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 PRSS46E5RG02 174 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 CXorf1O96002 111 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 S100PP25815 95 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 HLA-DRB5Q30154 266 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 OR5AU1Q8NGC0 362 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 OR5B3Q8NH48 314 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 BET1LQ9NYM9 111 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 LOC105371242A0A075B767 164 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 ZNF320A2RRD8 509 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 BUB1B-PAK6H3BSN5 160 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 UBE2L3P68036 154 aaKnown RBP10.24□□□□□ -0.77
SCAF11-209ENST00000547018 CD69Q07108 199 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 C1QL4Q86Z23 238 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 NIT2Q9NQR4 276 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
SCAF11-209ENST00000547018 F6UZH7 168 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 PCP4P48539 62 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 S100A12P80511 92 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 ZNF841Q6ZN19 808 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 GPR61Q9BZJ8 451 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 MPDU1O75352 247 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 MT-CO2P00403 227 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 LIPFP07098 398 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 STAG3L2P0CL84 134 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 STAG3L3P0CL85 134 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 VWC2Q2TAL6 325 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 PDPNQ86YL7 162 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 OCC1Q8TAD7 63 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 VSTM2AQ8TAG5 236 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 CBLN4Q9NTU7 201 aa10.23□□□□□ -0.77
SCAF11-209ENST00000547018 LSM4Q9Y4Z0 139 aaKnown RBP10.23□□□□□ -0.77
SCAF11-209ENST00000547018 TRGC1P0CF51 173 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 DLX6P56179 175 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 RELQ04864 619 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-209ENST00000547018 FBLN7Q53RD9 439 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 TMEM144Q7Z5S9 345 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 ST6GALNAC6Q969X2 333 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 SSBP3Q9BWW4 388 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-209ENST00000547018 FUT9Q9Y231 359 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 CGB1A6NKQ9 187 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 PPP5D1E7EU14 171 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 ITGB1BP1O14713 200 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 HTR1DP28221 377 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 RAB4BP61018 213 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 LYZP61626 148 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 TMEM177Q53S58 311 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 CENPVQ7Z7K6 275 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-209ENST00000547018 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 SGMS2Q8NHU3 365 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 NRGNQ92686 78 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 ABCA2Q9BZC7 2435 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 MDFIC2A0A1B0GVS7 189 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 FAM90A9PA6NNJ1 464 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 IGHV2-70P01814 119 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 AGAP20933 346 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 SP5Q6BEB4 398 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-209ENST00000547018 PQLC2Q6ZP29 291 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 TNFRSF19Q9NS68 423 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 ZNF355PQ9NSJ1 428 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 SLC45A2Q9UMX9 530 aa10.22□□□□□ -0.77
SCAF11-209ENST00000547018 AP4M1O00189 453 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-209ENST00000547018 IGLV2-23P01705 113 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 FABP4P15090 132 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 S100A2P29034 98 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 SUB1P53999 127 aaKnown RBP eCLIP10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 ERVFC1-1P60608 527 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 GNG5P63218 68 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 PNRC1Q12796 327 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
SCAF11-209ENST00000547018 WNK1Q9H4A3 2382 aa10.21□□□□□ -0.78
SCAF11-209ENST00000547018 A0A1B0GUS0 222 aa10.21□□□□□ -0.78
SCAF11-209ENST00000547018 MC5RP33032 325 aa10.21□□□□□ -0.78
SCAF11-209ENST00000547018 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.78
SCAF11-209ENST00000547018 OR10D4PQ8NGN7 298 aa10.21□□□□□ -0.78
SCAF11-209ENST00000547018 TNFRSF13BO14836 293 aaPredicted RBP10.2□□□□□ -0.78
SCAF11-209ENST00000547018 ZFP36P26651 326 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms