RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 TMED4Q7Z7H5 227 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 OR10C1Q96KK4 312 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 PRR13Q9NZ81 148 aa11.09□□□□□ -0.63
CCDC38-205ENST00000546947 CEBPZOSA8MTT3 80 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 TSPAN4O14817 238 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 OPRK1P41145 380 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 INPP1P49441 399 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 HAGHQ16775 308 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 NMSQ5H8A3 153 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 LINC00322Q6ZN03 302 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-205ENST00000546947 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
CCDC38-205ENST00000546947 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-205ENST00000546947 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-205ENST00000546947 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 RPS10-NUDT3A0A1W2PQS6 291 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 NAP1L6A6NFF2 107 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
CCDC38-205ENST00000546947 SCGB2A1O75556 95 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 YIF1AO95070 293 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 TMEM50AO95807 157 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 RBMS2Q15434 407 aaKnown RBP11.07□□□□□ -0.64
CCDC38-205ENST00000546947 BAK1Q16611 211 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 TRIQKQ629K1 86 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 GINS3Q9BRX5 216 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 FNDC4Q9H6D8 234 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-205ENST00000546947 SRD5A3Q9H8P0 318 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
CCDC38-205ENST00000546947 IGHV7-4-1A0A0J9YVY3 117 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 A0A1B0GU03 582 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 CLN5O75503 358 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 TNFRSF9Q07011 255 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 CENPSQ8N2Z9 138 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 TMEM116Q8NCL8 245 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
CCDC38-205ENST00000546947 WFDC10AQ9H1F0 79 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 HSPB7Q9UBY9 170 aa11.06□□□□□ -0.64
CCDC38-205ENST00000546947 TRAV30A0A087WSZ9 112 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 TRAV14DV4A0A0A6YYC5 116 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
CCDC38-205ENST00000546947 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
CCDC38-205ENST00000546947 CHEK1O14757 476 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 NXPH3O95157 252 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 SFT2D2O95562 160 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
CCDC38-205ENST00000546947 SLC25A4P12235 298 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 VAMP1P23763 118 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 NPY1RP25929 384 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 UBE2MP61081 183 aaKnown RBP11.05□□□□□ -0.64
CCDC38-205ENST00000546947 MLANAQ16655 118 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 TOMM20LQ6UXN7 152 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 SDHCQ99643 169 aaPredicted RBP11.05□□□□□ -0.64
CCDC38-205ENST00000546947 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 MRPL36Q9P0J6 103 aaKnown RBP11.05□□□□□ -0.64
CCDC38-205ENST00000546947 U3KQ87 197 aa11.05□□□□□ -0.64
CCDC38-205ENST00000546947 SLC25A6P12236 298 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 BMI1P35226 326 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 PPP1R1AQ13522 171 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 ETFRF1Q6IPR1 90 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 OR1S1Q8NH92 325 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
CCDC38-205ENST00000546947 PUS1Q9Y606 427 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC38-205ENST00000546947 KMT2CQ8NEZ4 4911 aaKnown RBP11.04□□□□□ -0.64
CCDC38-205ENST00000546947 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 CENPXA8MT69 81 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 NDUFB6O95139 128 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 CD5P06127 495 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 TMEM170AQ8WVE7 144 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 RNF2Q99496 336 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 FAM110AQ9BQ89 295 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 C7orf50Q9BRJ6 194 aaKnown RBP11.03□□□□□ -0.64
CCDC38-205ENST00000546947 RBKSQ9H477 322 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 TMED3Q9Y3Q3 217 aa11.03□□□□□ -0.64
CCDC38-205ENST00000546947 FAM90A26D6RGX4 464 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 C3orf84H3BNL1 204 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 PITX3O75364 302 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 IFNA10P01566 189 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 IL7P13232 177 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 ATP5IP56385 69 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-205ENST00000546947 OR1S2Q8NGQ3 325 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 CITED4Q96RK1 184 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 VSIRQ9H7M9 311 aa11.02□□□□□ -0.65
CCDC38-205ENST00000546947 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
CCDC38-205ENST00000546947 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
CCDC38-205ENST00000546947 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
CCDC38-205ENST00000546947 NPPCP23582 126 aa11.01□□□□□ -0.65
CCDC38-205ENST00000546947 RND2P52198 227 aa11.01□□□□□ -0.65
CCDC38-205ENST00000546947 FAM90A2PQ658T7 463 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms