RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OR2J2O76002 312 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 TCL1BO95988 128 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 SMIM10L2AP0DMW4 78 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 SMIM10L2BP0DMW5 78 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 BRS3P32247 399 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 RHEBQ15382 184 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 KHDC3LQ587J8 217 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 ARFGEF3Q5TH69 2177 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 DPPA3Q6W0C5 159 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 PHF13Q86YI8 300 aaPredicted RBP0.51□□□□□ -2.33
CCDC38-204ENST00000546816 C12orf45Q8N5I9 185 aaPredicted RBP0.51□□□□□ -2.33
CCDC38-204ENST00000546816 SIGLECL1Q8N7X8 197 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 ROBO3Q96MS0 1386 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 GINS4Q9BRT9 223 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 PARVGQ9HBI0 331 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 SLC39A9Q9NUM3 307 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 HECW2Q9P2P5 1572 aa0.51□□□□□ -2.33
CCDC38-204ENST00000546816 LAMB4A4D0S4 1761 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 TRAV1-1A0A0B4J248 108 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 IGKV1-9A0A0C4DH69 117 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 BAALC-AS2P0C853 105 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 SSR2P43308 183 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 SPOPLQ6IQ16 392 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 HIST3H2BBQ8N257 126 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 OR52R1Q8NGF1 315 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 OR8J2Q8NGG1 315 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 DNAJC9Q8WXX5 260 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 LINC00526Q96FQ7 95 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 DCUN1D1Q96GG9 259 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 C8orf76Q96K31 380 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 OBSCN-AS1Q96MR7 158 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 MRPL57Q9BQC6 102 aaKnown RBP0.5□□□□□ -2.33
CCDC38-204ENST00000546816 TMEM147Q9BVK8 224 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 ULBP3Q9BZM4 244 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 DCSTAMPQ9H295 470 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 TAS2R4Q9NYW5 299 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 ERGIC3Q9Y282 383 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 ALPK2Q86TB3 2170 aa0.5□□□□□ -2.33
CCDC38-204ENST00000546816 HECW1Q76N89 1606 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 ADGRB2O60241 1585 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 PLB1Q6P1J6 1458 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 A0A087WUJ7 227 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 TRBV6-7A0A0A0MS04 114 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 FAM236DA0A1B0GTK5 79 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 SMIM23A6NLE4 172 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 M0R2N4 97 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 HYPMO75409 117 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 LYZL6O75951 148 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 OR2B3O76000 313 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 UBL3O95164 117 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 CNIH1O95406 144 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 CRYZL1O95825 349 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 FAM236CP0DP71 79 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 ZNF93P35789 620 aaPredicted RBP0.49□□□□□ -2.33
CCDC38-204ENST00000546816 OMPP47874 163 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 DEFA1P59665 94 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 RAB4BP61018 213 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 RANP62826 216 aaKnown RBP0.49□□□□□ -2.33
CCDC38-204ENST00000546816 RHOGP84095 191 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 IAH1Q2TAA2 248 aaPredicted RBP0.49□□□□□ -2.33
CCDC38-204ENST00000546816 LINC01554Q52M75 96 aa0.49□□□□□ -2.33
CCDC38-204ENST00000546816 ZNF418Q8TF45 676 aaPredicted RBP0.49□□□□□ -2.33
CCDC38-204ENST00000546816 TNRC6BQ9UPQ9 1833 aaKnown RBP0.49□□□□□ -2.33
CCDC38-204ENST00000546816 KIF13BQ9NQT8 1826 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 RP1P56715 2156 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 TRAV12-1A0A0B4J245 112 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 PIRO00625 290 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 ZNF682O95780 498 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 RBP1P09455 135 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 CNBPP62633 177 aaKnown RBP0.48□□□□□ -2.33
CCDC38-204ENST00000546816 C12orf74Q32Q52 190 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 OR13D1Q8NGV5 346 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 OR10J5Q8NHC4 309 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 BORCS7Q96B45 105 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 CCDC42Q96M95 316 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 OSTCQ9NRP0 149 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 KLK9Q9UKQ9 250 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 HS3ST2Q9Y278 367 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 ZFP30Q9Y2G7 519 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 CCDC88AQ3V6T2 1871 aa0.48□□□□□ -2.33
CCDC38-204ENST00000546816 ANAPC1Q9H1A4 1944 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 INE1O15225 51 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 LYPLA2O95372 231 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 TCRBP04435 133 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 S100A4P26447 101 aaKnown RBP0.47□□□□□ -2.33
CCDC38-204ENST00000546816 LSM6P62312 80 aaKnown RBP0.47□□□□□ -2.33
CCDC38-204ENST00000546816 RGS21Q2M5E4 152 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 RNASE10Q5GAN6 216 aaKnown RBP0.47□□□□□ -2.33
CCDC38-204ENST00000546816 TRAPPC6BQ86SZ2 158 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 OOSP2Q86WS3 158 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 TRAPPC5Q8IUR0 188 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 OR6V1Q8N148 313 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 Q8N814 137 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 GDPD1Q8N9F7 314 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 CT55Q8WUE5 264 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 SFT2D1Q8WV19 159 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 GPR146Q96CH1 333 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 RNF122Q9H9V4 155 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.47□□□□□ -2.33
CCDC38-204ENST00000546816 NHP2Q9NX24 153 aaKnown RBP0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms