RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GAGE12BA1L429 117 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 GAGE12HA6NDE8 117 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 C5orf51A6NDU8 294 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 M0QZ24 198 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 GOSR2O14653 212 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 CYB5BO43169 146 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 SSSCA1O60232 199 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 OR2J3O76001 311 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 SCAF4O95104 1147 aaKnown RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 LGALS1P09382 135 aaKnown RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 HIST1H1BP16401 226 aaKnown RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 SNCAP37840 140 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 NKX2-1P43699 371 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 RAB9AP51151 201 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 ERHP84090 104 aaKnown RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 EXOSC2Q13868 293 aaKnown RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 C15orf32Q32M92 178 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 BSXQ3C1V8 233 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 NSUN5P1Q3KNT7 163 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 C11orf87Q6NUJ2 197 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 ZBTB8BQ8NAP8 495 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 NECAP1Q8NC96 275 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 SLC24A4Q8NFF2 622 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 OR4D5Q8NGN0 318 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 OR1P1Q8NH06 330 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 DTD1Q8TEA8 209 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 OR10C1Q96KK4 312 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 UBE2E2Q96LR5 201 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 P2RX4Q99571 388 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 RBKSQ9H477 322 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 GNB4Q9HAV0 340 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 HEYLQ9NQ87 328 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-211ENST00000546304 ZFP57Q9NU63 452 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 DNAH3Q8TD57 4116 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 C13orf42A0A1B0GVH6 325 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 MFSD2BA6NFX1 497 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 DIRC3C9JPN6 131 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 WRBO00258 174 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 SYNGR2O43760 224 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 MED6O75586 246 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 IGHV3-11P01762 117 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 RNASE2P10153 161 aaKnown RBP4.89□□□□□ -1.63
PRKDC-211ENST00000546304 IAPPP10997 89 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 NPY1RP25929 384 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 HTR2BP41595 481 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 CDX1P47902 265 aaPredicted RBP4.89□□□□□ -1.63
PRKDC-211ENST00000546304 MFAP2P55001 183 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 KIAA0141Q14154 515 aaPredicted RBP4.89□□□□□ -1.63
PRKDC-211ENST00000546304 KLK9Q2XQG4 91 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 DEFB136Q30KP8 78 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 GSG1LQ6UXU4 331 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 ZNF491Q8N8L2 437 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 OR4F17Q8NGA8 305 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 OR1L6Q8NGR2 347 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 USMG5Q96IX5 58 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 CIB3Q96Q77 187 aaPredicted RBP4.89□□□□□ -1.63
PRKDC-211ENST00000546304 OR5B12Q96R08 314 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 OR4F4Q96R69 305 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 MAGT1Q9H0U3 335 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 HIPK2Q9H2X6 1198 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 THYN1Q9P016 225 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 GSKIPQ9P0R6 139 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 MGAT4CQ9UBM8 478 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 KLK9Q9UKQ9 250 aa4.89□□□□□ -1.63
PRKDC-211ENST00000546304 RCL1Q9Y2P8 373 aaKnown RBP4.89□□□□□ -1.63
PRKDC-211ENST00000546304 H3BP45 60 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 I3L521 148 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 K7EIM0 57 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 CORTO00230 105 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 NDUFB8O95169 186 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 SIX6O95475 246 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 IFNA10P01566 189 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
PRKDC-211ENST00000546304 OPRK1P41145 380 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
PRKDC-211ENST00000546304 H2BFSP57053 126 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 S100A10P60903 97 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 POLR2GP62487 172 aaKnown RBP eCLIP4.88□□□□□ -1.63
PRKDC-211ENST00000546304 RUNX1Q01196 453 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 ATP5G2Q06055 141 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 FHL3Q13643 280 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 C2orf83Q53S99 150 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 PVRIGQ6DKI7 326 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 SLC25A24Q6NUK1 477 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 ARL6IP6Q8N6S5 226 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 TMEM170AQ8WVE7 144 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 EEF1AKMT3Q96AZ1 226 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 PINX1Q96BK5 328 aaKnown RBP4.88□□□□□ -1.63
PRKDC-211ENST00000546304 CXorf58Q96LI9 332 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 C2orf50Q96LR7 162 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 MED28Q9H204 178 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 U3KQ87 197 aa4.88□□□□□ -1.63
PRKDC-211ENST00000546304 IGHV4OR15-8A0A075B7B6 117 aa4.87□□□□□ -1.63
PRKDC-211ENST00000546304 A0A087WW49 117 aa4.87□□□□□ -1.63
PRKDC-211ENST00000546304 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
PRKDC-211ENST00000546304 C15orf62A8K5M9 175 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms