RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 DUSP18Q8NEJ0 188 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 PINX1Q96BK5 328 aaKnown RBP8.95□□□□□ -0.98
YBX3-217ENST00000546164 C19orf73Q9NVV2 129 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 HSPB7Q9UBY9 170 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 A6NHS1 94 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 C15orf62A8K5M9 175 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 CEBPZOSA8MTT3 80 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 GNG7O60262 68 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 PITX3O75364 302 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 SFT2D2O95562 160 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 FRMD6-AS1P0C7T7 363 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 IGHV4-30-4P0DP06 118 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 SLC25A6P12236 298 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 VAMP1P23763 118 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 BTCP35070 178 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 TNFRSF9Q07011 255 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 PPP1R1AQ13522 171 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 ANKRD55Q3KP44 614 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 C2orf83Q53S99 150 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 C11orf87Q6NUJ2 197 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 TMEM61Q8N0U2 210 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 SLC24A4Q8NFF2 622 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 RNASEH2CQ8TDP1 164 aaKnown RBP8.94□□□□□ -0.98
YBX3-217ENST00000546164 OR10C1Q96KK4 312 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 FNDC4Q9H6D8 234 aaPredicted RBP8.94□□□□□ -0.98
YBX3-217ENST00000546164 HEYLQ9NQ87 328 aaPredicted RBP8.94□□□□□ -0.98
YBX3-217ENST00000546164 TMED3Q9Y3Q3 217 aa8.94□□□□□ -0.98
YBX3-217ENST00000546164 CENPXA8MT69 81 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 IGHV3-48P01763 117 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 CNPY1Q3B7I2 92 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 BTNL8Q6UX41 500 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 NOXA1Q86UR1 476 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 SBSPONQ8IVN8 264 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 OR4X1Q8NH49 305 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 TMEM170AQ8WVE7 144 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 WDR89Q96FK6 387 aaPredicted RBP8.93□□□□□ -0.98
YBX3-217ENST00000546164 HIPK2Q9H2X6 1198 aa8.93□□□□□ -0.98
YBX3-217ENST00000546164 RPS10-NUDT3A0A1W2PQS6 291 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 C9orf170A2RU37 121 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 FAM90A26D6RGX4 464 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 CLN5O75503 358 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 TMEM50AO95807 157 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 OPRK1P41145 380 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 ATP5IP56385 69 aaPredicted RBP8.92□□□□□ -0.98
YBX3-217ENST00000546164 ASCL2Q99929 193 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 NEURL2Q9BR09 285 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 C20orf24Q9BUV8 137 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 CCDC32Q9BV29 185 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 MRPL36Q9P0J6 103 aaKnown RBP8.92□□□□□ -0.98
YBX3-217ENST00000546164 U3KQ87 197 aa8.92□□□□□ -0.98
YBX3-217ENST00000546164 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 LINC00854A0A1B0GVQ3 168 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 PLA2G10O15496 165 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 CD7P09564 240 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 SLC25A4P12235 298 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 NPY1RP25929 384 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 CD81P60033 236 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 GUCA2BQ16661 112 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 TOMM20LQ6UXN7 152 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 ZNF600Q6ZNG1 722 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 TMEM116Q8NCL8 245 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 OR1S1Q8NH92 325 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 DTD1Q8TEA8 209 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 SPAG8Q99932 426 aaPredicted RBP8.91□□□□□ -0.98
YBX3-217ENST00000546164 RBKSQ9H477 322 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 SMPXQ9UHP9 88 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 FLVCR2Q9UPI3 526 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 U3KQK5 164 aa8.91□□□□□ -0.98
YBX3-217ENST00000546164 TRAV30A0A087WSZ9 112 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 IGHV7-4-1A0A0J9YVY3 117 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 TSPAN4O14817 238 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 LYRM1O43325 122 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 SCGB2A1O75556 95 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 YIF1AO95070 293 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 NXPH3O95157 252 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 DHRS2Q13268 280 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 MLANAQ16655 118 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 LAMTOR1Q6IAA8 161 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 ETFRF1Q6IPR1 90 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 PRSS54Q6PEW0 395 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 LINC00322Q6ZN03 302 aaPredicted RBP8.9□□□□□ -0.98
YBX3-217ENST00000546164 RBPMS2Q6ZRY4 209 aaKnown RBP8.9□□□□□ -0.98
YBX3-217ENST00000546164 SLC16A13Q7RTY0 426 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 LYG2Q86SG7 212 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 S100ZQ8WXG8 99 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 GINS3Q9BRX5 216 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
YBX3-217ENST00000546164 NBEAL2Q6ZNJ1 2754 aa8.9□□□□□ -0.99
YBX3-217ENST00000546164 IGHV3OR16-8A0A075B7F1 116 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 TRAV14DV4A0A0A6YYC5 116 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 CHEK1O14757 476 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 SCAF4O95104 1147 aaKnown RBP8.89□□□□□ -0.99
YBX3-217ENST00000546164 IFNA10P01566 189 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 IGKV1-17P01599 117 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 OR4E1P0C645 316 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 IGLC1P0CG04 106 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 GGNBP1Q5YKI7 109 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 OR52B4Q8NGK2 314 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 COQ8AQ8NI60 647 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms