RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 TPPP2P59282 170 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 TMEM14EPQ6UXP3 125 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 ERASQ7Z444 233 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 GBGT1Q8N5D6 347 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 GNB4Q9HAV0 340 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 hADV38S2A0JD32 116 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 PYYP10082 97 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 MORN2Q502X0 79 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 ACTL10Q5JWF8 245 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 DNLZQ5SXM8 178 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 RNASEKQ6P5S7 137 aaKnown RBP8.09□□□□□ -1.11
TRAF1-203ENST00000546084 LINC00596Q86U02 117 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 LINC01551Q86U37 167 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 NACAE9PAV3 2078 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 M0QZ24 198 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 ADH4P08319 380 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 LINC00869P0C866 280 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
TRAF1-203ENST00000546084 ARF6P62330 175 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 BSPH1Q075Z2 132 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 SRSF7Q16629 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRAF1-203ENST00000546084 LRRC10Q5BKY1 277 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 BEND2Q8NDZ0 799 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 STXBP6Q8NFX7 210 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 SFRP2Q96HF1 295 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 NPVFQ9HCQ7 196 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 TNFRSF19Q9NS68 423 aa8.09□□□□□ -1.11
TRAF1-203ENST00000546084 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 IQCF6A8MYZ5 107 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 PDE6DO43924 150 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 NUPR1O60356 82 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 DUTP33316 252 aaKnown RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 ADMP35318 185 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 GPR6P46095 362 aaPredicted RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 ODF1Q14990 250 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 ZNF474Q6S9Z5 364 aaPredicted RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 WDR31Q8NA23 367 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 OR5AU1Q8NGC0 362 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 MRPL20Q9BYC9 149 aaKnown RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 IGHV3-49A0A0A0MS15 119 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 FAM90A26D6RGX4 464 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 IL6RP08887 468 aaPredicted RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 ZNF114Q8NC26 417 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 OR1L4Q8NGR5 311 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 DIRC2Q96SL1 478 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 AGMATQ9BSE5 352 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 ZNF586Q9NXT0 402 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 VENTXO95231 258 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 MFAP2P55001 183 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 GNG5P63218 68 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 DIAPH2-AS1Q14236 149 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 SLC35E4Q6ICL7 350 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 MEGF9Q9H1U4 602 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 HSPB7Q9UBY9 170 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
TRAF1-203ENST00000546084 HCFC1P51610 2035 aa8.08□□□□□ -1.12
TRAF1-203ENST00000546084 LCN2P80188 198 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 OCC1Q8TAD7 63 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 FAM222BQ8WU58 562 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 RPEQ96AT9 228 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 NABP2Q9BQ15 211 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 PYGO2Q9BRQ0 406 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 A0A1W2PN81 502 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 CGB1A6NKQ9 187 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 IGLV2-14P01704 120 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 NPPCP23582 126 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 TDGF1P3P51864 188 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 RPL11P62913 178 aaKnown RBP8.07□□□□□ -1.12
TRAF1-203ENST00000546084 SSBP4Q9BWG4 385 aaPredicted RBP8.07□□□□□ -1.12
TRAF1-203ENST00000546084 MTORP42345 2549 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 PPIAL4EA0A075B759 164 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 PPIAL4DF5H284 164 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 PPIAL4FP0DN26 164 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 SMAGPQ0VAQ4 97 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 ZNF146Q15072 292 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 TMEM183BQ1AE95 376 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 MSMPQ1L6U9 139 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 PRR7Q8TB68 274 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
TRAF1-203ENST00000546084 PPIAL4AQ9Y536 164 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 INSIG2Q9Y5U4 225 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 NAV2Q8IVL1 2488 aa8.07□□□□□ -1.12
TRAF1-203ENST00000546084 HSBP1O75506 76 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 SERF1AO75920 110 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 CD40P25942 277 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 HSPE1P61604 102 aaKnown RBP8.06□□□□□ -1.12
TRAF1-203ENST00000546084 C22orf34Q6ZV56 151 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 ATG2AQ2TAZ0 1938 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 EXPH5Q8NEV8 1989 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 AHRRA9YTQ3 701 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 RBFOX2O43251 390 aaKnown RBP eCLIP8.06□□□□□ -1.12
TRAF1-203ENST00000546084 KRTAP27-1Q3LI81 207 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms