RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 APOA2P02652 100 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 PYYP10082 97 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 MGST1P10620 155 aaKnown RBP12.35□□□□□ -0.43
CNN3-207ENST00000545882 MEF2CQ06413 473 aaPredicted RBP12.35□□□□□ -0.43
CNN3-207ENST00000545882 OR10J3Q5JRS4 329 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 C10orf55Q5SWW7 151 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 TMEM200BQ69YZ2 307 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 TMEM167AQ8TBQ9 72 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 GAL3ST2Q9H3Q3 398 aa12.35□□□□□ -0.43
CNN3-207ENST00000545882 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
CNN3-207ENST00000545882 BOD1L1Q8NFC6 3051 aa12.34□□□□□ -0.43
CNN3-207ENST00000545882 LAMA5O15230 3695 aa12.34□□□□□ -0.43
CNN3-207ENST00000545882 CA1P00915 261 aaPredicted RBP12.34□□□□□ -0.43
CNN3-207ENST00000545882 IGLV2-23P01705 113 aa12.34□□□□□ -0.43
CNN3-207ENST00000545882 AMY1AP04745 511 aa12.34□□□□□ -0.43
CNN3-207ENST00000545882 UBE2L3P68036 154 aaKnown RBP12.34□□□□□ -0.43
CNN3-207ENST00000545882 ERHP84090 104 aaKnown RBP12.34□□□□□ -0.43
CNN3-207ENST00000545882 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
CNN3-207ENST00000545882 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
CNN3-207ENST00000545882 MIEN1Q9BRT3 115 aa12.34□□□□□ -0.43
CNN3-207ENST00000545882 CDC42EP3Q9UKI2 254 aa12.34□□□□□ -0.43
CNN3-207ENST00000545882 A0A1W2PS18 150 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 NKX6-3A6NJ46 265 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
CNN3-207ENST00000545882 BRS3P32247 399 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 COX19Q49B96 90 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 FLYWCH2Q96CP2 140 aaKnown RBP12.33□□□□□ -0.44
CNN3-207ENST00000545882 MBD6Q96DN6 1003 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 RNF2Q99496 336 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 FAM103A1Q9BTL3 118 aaKnown RBP12.33□□□□□ -0.44
CNN3-207ENST00000545882 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 C17orf100A8MU93 164 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
CNN3-207ENST00000545882 ADIPOQQ15848 244 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 SIGLECL1Q8N7X8 197 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
CNN3-207ENST00000545882 ZNF355PQ9NSJ1 428 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 PAM16Q9Y3D7 125 aa12.33□□□□□ -0.44
CNN3-207ENST00000545882 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
CNN3-207ENST00000545882 DPRXA6NFQ7 191 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 TNFRSF13BO14836 293 aaPredicted RBP12.32□□□□□ -0.44
CNN3-207ENST00000545882 SRIP30626 198 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 RUSC1-AS1Q66K80 236 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 LYPD2Q6UXB3 125 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 ZNF596Q8TC21 504 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 RITA1Q96K30 269 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
CNN3-207ENST00000545882 A0A1W2PN81 502 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 TCRBV4S1A1TA0A5B7 111 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 HLA-DQA1P01909 254 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 RPL19P84098 196 aaKnown RBP12.31□□□□□ -0.44
CNN3-207ENST00000545882 C10orf113Q5VZT2 155 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 THAP8Q8NA92 274 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 OR4A5Q8NH83 315 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 FXYD5Q96DB9 178 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 PAXXQ9BUH6 204 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 VAMP8Q9BV40 100 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 ZNF430Q9H8G1 570 aaPredicted RBP12.31□□□□□ -0.44
CNN3-207ENST00000545882 AMMECR1Q9Y4X0 333 aaPredicted RBP12.31□□□□□ -0.44
CNN3-207ENST00000545882 TRAV34A0A0B4J273 112 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 COX7A2P2O60397 106 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 NBL1P41271 181 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 SLAQ13239 276 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 TMEM183BQ1AE95 376 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 GDF5OSQ5U4N7 250 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 NIT1Q86X76 327 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 OR4C13Q8NGP0 309 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 TPSG1Q9NRR2 321 aa12.31□□□□□ -0.44
CNN3-207ENST00000545882 KLK10O43240 276 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 ZNF253O75346 499 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 MYCNOSP40205 109 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 KRTDAPP60985 99 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 ZNF124Q15973 351 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 ZNF841Q6ZN19 808 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
CNN3-207ENST00000545882 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 LINC00311Q8N616 119 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 C7orf69Q9H7B7 122 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 ZGRF1Q86YA3 2104 aa12.3□□□□□ -0.44
CNN3-207ENST00000545882 BSNQ9UPA5 3926 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 PPIAL4EA0A075B759 164 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 DIRC3C9JPN6 131 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 PPIAL4DF5H284 164 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 TMEM178BH3BS89 294 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 PEX7O00628 323 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 THBDP07204 575 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 PPIAL4FP0DN26 164 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 CTRLP40313 264 aa12.29□□□□□ -0.44
CNN3-207ENST00000545882 AMTP48728 403 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms