RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 WASHC3Q9Y3C0 194 aa12.64□□□□□ -0.39
SCAP-215ENST00000545718 SNURFLB1AK76 121 aa12.64□□□□□ -0.39
SCAP-215ENST00000545718 RPEL1Q2QD12 228 aa12.64□□□□□ -0.39
SCAP-215ENST00000545718 TMEM177Q53S58 311 aa12.64□□□□□ -0.39
SCAP-215ENST00000545718 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
SCAP-215ENST00000545718 MRPL18Q9H0U6 180 aaKnown RBP12.64□□□□□ -0.39
SCAP-215ENST00000545718 MOSP00540 346 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 LGALS4P56470 323 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 VSTM2AQ8TAG5 236 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 C11orf52Q96A22 123 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 C14orf144Q96I85 54 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 DNAJC4Q9NNZ3 241 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 SPTBN1Q01082 2364 aaKnown RBP12.63□□□□□ -0.39
SCAP-215ENST00000545718 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 ORM2P19652 201 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 SPACA3Q8IXA5 215 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 GBGT1Q8N5D6 347 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 LINC01560Q8TB33 94 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 TMEM186Q96B77 213 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 NGBQ9NPG2 151 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 ZNF355PQ9NSJ1 428 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 MRPL36Q9P0J6 103 aaKnown RBP12.63□□□□□ -0.39
SCAP-215ENST00000545718 IGHV1-69-2A0A0G2JMI3 117 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 A0A1W2PN81 502 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 CA1P00915 261 aaPredicted RBP12.63□□□□□ -0.39
SCAP-215ENST00000545718 PDLIM4P50479 330 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 RPH3ALQ9UNE2 315 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
SCAP-215ENST00000545718 FAM90A27PA6NNH2 459 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 C9JCJ5 164 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 COX7A1P24310 79 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 TNXAQ16473 311 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 KIAA1644Q3SXP7 199 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 VMA21Q3ZAQ7 101 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
SCAP-215ENST00000545718 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 CRISP2P16562 243 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 CNTFRP26992 372 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 SUB1P53999 127 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCAP-215ENST00000545718 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
SCAP-215ENST00000545718 BAGE3Q86Y29 109 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 MS4A10Q96PG2 267 aa12.62□□□□□ -0.39
SCAP-215ENST00000545718 CGB1A6NKQ9 187 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 SHISA9B4DS77 424 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 IGHV1-8P0DP01 117 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 PRR27Q6MZM9 219 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 CMTM2Q8TAZ6 248 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 BLNKQ8WV28 456 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.61□□□□□ -0.39
SCAP-215ENST00000545718 A0A1W2PPI3 338 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 ZNF705FA8MVS1 300 aaPredicted RBP12.61□□□□□ -0.39
SCAP-215ENST00000545718 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
SCAP-215ENST00000545718 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
SCAP-215ENST00000545718 CACNG8Q8WXS5 425 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 SSBP3Q9BWW4 388 aaPredicted RBP12.61□□□□□ -0.39
SCAP-215ENST00000545718 V9GYV3 84 aa12.61□□□□□ -0.39
SCAP-215ENST00000545718 GCGP01275 180 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 USF2Q15853 346 aaPredicted RBP12.6□□□□□ -0.39
SCAP-215ENST00000545718 TBR1Q16650 682 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 PAXXQ9BUH6 204 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 SLC25A2Q9BXI2 301 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 H3BTX0 84 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 GATCO43716 136 aaKnown RBP12.6□□□□□ -0.39
SCAP-215ENST00000545718 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
SCAP-215ENST00000545718 IBA57Q5T440 356 aaKnown RBP12.6□□□□□ -0.39
SCAP-215ENST00000545718 OR1B1Q8NGR6 318 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 SCNM1Q9BWG6 230 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 F2Z2F3 143 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 TMEM155Q4W5P6 130 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 ST6GALNAC3Q8NDV1 305 aa12.6□□□□□ -0.39
SCAP-215ENST00000545718 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 AKAP6Q13023 2319 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 IGLV2-23P01705 113 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 CD3EP07766 207 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 PPOXP50336 477 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 ATP5IP56385 69 aaPredicted RBP12.59□□□□□ -0.39
SCAP-215ENST00000545718 RUSC1-AS1Q66K80 236 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 ST6GALNAC6Q969X2 333 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 WNK2Q9Y3S1 2297 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 SERF1AO75920 110 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 YPEL3P61236 119 aaPredicted RBP12.59□□□□□ -0.39
SCAP-215ENST00000545718 RBPJQ06330 500 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 LINC00305Q7Z4B0 112 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 DMRTC2Q8IXT2 367 aaPredicted RBP12.59□□□□□ -0.39
SCAP-215ENST00000545718 FAM167A-AS1Q96KT0 104 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 C19orf24Q9BVV8 132 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
SCAP-215ENST00000545718 GSX1Q9H4S2 264 aaPredicted RBP12.59□□□□□ -0.39
SCAP-215ENST00000545718 AMMECR1Q9Y4X0 333 aaPredicted RBP12.59□□□□□ -0.39
SCAP-215ENST00000545718 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.4
SCAP-215ENST00000545718 BPIFB3P59826 476 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms