RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZNF329Q86UD4 541 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 OR4A5Q8NH83 315 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 GAFA1Q96PS6 74 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 PAXXQ9BUH6 204 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 CLEC7AQ9BXN2 247 aa7.11□□□□□ -1.27
TDP1-204ENST00000545686 SRRM4A7MD48 611 aaKnown RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 NDUFB8O95169 186 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 TOMM40O96008 361 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 GNG10P50151 68 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 UBE2G1P62253 170 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 SPRNQ5BIV9 151 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 HES3Q5TGS1 186 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 C10orf113Q5VZT2 155 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 FAM19A2Q8N3H0 131 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 THAP8Q8NA92 274 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 SNRNP40Q96DI7 357 aaKnown RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 ZNF430Q9H8G1 570 aaPredicted RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 C1RLQ9NZP8 487 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 SOX21Q9Y651 276 aaPredicted RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 URB1O60287 2271 aaKnown RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 ZDBF2Q9HCK1 2354 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 TRAV17A0A0B4J275 112 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 A0A1B0GXF2 115 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 TCRBV4S1A1TA0A5B7 111 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 CA1P00915 261 aaPredicted RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 CA7P43166 264 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 RPL8P62917 257 aaKnown RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 TMEM177Q53S58 311 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 CT83Q5H943 113 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 TIMM23BQ5SRD1 257 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 STXBP6Q8NFX7 210 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 LOXL4Q96JB6 756 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 WNT10AQ9GZT5 417 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 ZNF355PQ9NSJ1 428 aa7.1□□□□□ -1.27
TDP1-204ENST00000545686 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
TDP1-204ENST00000545686 hADV38S2A0JD32 116 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 H0YJW9 148 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 M0R2Z0 102 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 SPRY3O43610 288 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 MYCNOSP40205 109 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 TNXAQ16473 311 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 MORN5Q5VZ52 161 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 FAM71F2Q6NXP2 309 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 DHRS13Q6UX07 377 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 NHLRC2Q8NBF2 726 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 VSTM2AQ8TAG5 236 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 FAM168AQ92567 244 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 FXYD5Q96DB9 178 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 HARBI1Q96MB7 349 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 SSBP3Q9BWW4 388 aaPredicted RBP7.09□□□□□ -1.27
TDP1-204ENST00000545686 TNFRSF19Q9NS68 423 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 LINC00312Q9Y6C7 94 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 TRAV5A0A0B4J249 113 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 IGHV1-69-2A0A0G2JMI3 117 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 MBD3L4A6NDZ8 208 aaPredicted RBP7.09□□□□□ -1.27
TDP1-204ENST00000545686 MBD3L3A6NE82 208 aaPredicted RBP7.09□□□□□ -1.27
TDP1-204ENST00000545686 MBD3L5A6NJ08 208 aaPredicted RBP7.09□□□□□ -1.27
TDP1-204ENST00000545686 SUB1P53999 127 aaKnown RBP eCLIP7.09□□□□□ -1.27
TDP1-204ENST00000545686 PLA2G2CQ5R387 149 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 GDF5OSQ5U4N7 250 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 TEX36Q5VZQ5 186 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 OR10W1Q8NGF6 305 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 MBD3L2Q8NHZ7 208 aaPredicted RBP7.09□□□□□ -1.27
TDP1-204ENST00000545686 TMEM167AQ8TBQ9 72 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 GAL3ST2Q9H3Q3 398 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 KLF12Q9Y4X4 402 aa7.09□□□□□ -1.27
TDP1-204ENST00000545686 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 M0R1B8 84 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 CRXO43186 299 aaPredicted RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 TCF21O43680 179 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 FSTL3O95633 263 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 TNFSF4P23510 183 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 MLANAQ16655 118 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 EBLN2Q6P2I7 272 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 DUX4L9Q6RFH8 374 aaPredicted RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 OR5AN1Q8NGI8 311 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 COX11Q9Y6N1 276 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 CADP27708 2225 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 NAV3Q8IVL0 2385 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 CDX4O14627 284 aaPredicted RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 PYYP10082 97 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 HBBP68871 147 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 TNFAIP6P98066 277 aaPredicted RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 MEF2CQ06413 473 aaPredicted RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 FAM201AQ5SY85 155 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 RNASEKQ6P5S7 137 aaKnown RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 PDPNQ86YL7 162 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 MUC15Q8N387 334 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 ZNF738Q8NE65 137 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 FDCSPQ8NFU4 85 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 OR2T6Q8NHC8 308 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 ZNF596Q8TC21 504 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms