RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 NOTCH3Q9UM47 2321 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 IGHV4OR15-8A0A075B7B6 117 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 A0A087WW49 117 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 E5RGE8 158 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 FNDC10F2Z333 226 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 NUPL2O15504 423 aaKnown RBP9.05□□□□□ -0.96
SNHG1-221ENST00000544983 TGOLN2O43493 480 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 GNG7O60262 68 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 DEDDO75618 318 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 TSPAN15O95858 294 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-221ENST00000544983 ARL3P36405 182 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 PAX9P55771 341 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 DEFA5Q01523 94 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 CD69Q07108 199 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 RPEL1Q2QD12 228 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 DEFB136Q30KP8 78 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 FAM106AQ4KMX7 169 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 Q56UQ5 140 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 ACSM6Q6P461 480 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 TMEM14EPQ6UXP3 125 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 GPHB5Q86YW7 130 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 TMEM170AQ8WVE7 144 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 PPP1R1CQ8WVI7 109 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 GPR61Q9BZJ8 451 aa9.05□□□□□ -0.96
SNHG1-221ENST00000544983 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-221ENST00000544983 BMPR1BO00238 502 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 CLN5O75503 358 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 TMEM50AO95807 157 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 CXCL3P19876 107 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 HOXD3P31249 432 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 GPR183P32249 361 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 RAP2BP61225 183 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 RELQ04864 619 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 KLF5Q13887 457 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 FCN2Q15485 313 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 HIST2H2BDQ6DRA6 164 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 OR10P1Q8NGE3 313 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 RCC1LQ96I51 464 aaKnown RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 SLC35E1Q96K37 410 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 OR4C12Q96R67 309 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 ZNF436Q9C0F3 470 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 SLC25A31Q9H0C2 315 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 C11orf1Q9H5F2 150 aa9.04□□□□□ -0.96
SNHG1-221ENST00000544983 LYRM2Q9NU23 88 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 PAIP2BQ9ULR5 123 aaKnown RBP9.04□□□□□ -0.96
SNHG1-221ENST00000544983 OR2T8A6NH00 312 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 H3BP45 60 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 LGALS9O00182 355 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 MPC2O95563 127 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 CTSGP08311 255 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 CD33P20138 364 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 P2RY1P47900 373 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 CAV2P51636 162 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 HBG1P69891 147 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 HBG2P69892 147 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 PRSS54Q6PEW0 395 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 Q6ZNX1 250 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 SLC16A13Q7RTY0 426 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 STX12Q86Y82 276 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 C1QL4Q86Z23 238 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 UBAC2Q8NBM4 344 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 OR11H7Q8NGC8 314 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 TRRAPQ9Y4A5 3859 aa9.03□□□□□ -0.96
SNHG1-221ENST00000544983 IGHV3-21A0A0B4J1V1 117 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 PRSS46E5RG02 174 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 F8W735 103 aaPredicted RBP9.02□□□□□ -0.97
SNHG1-221ENST00000544983 NDUFA4O00483 81 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 OVOL1O14753 267 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 TRBV12-3P01733 135 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 IGHV3-23P01764 117 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 FABP1P07148 127 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 METTL15P1P0C7V9 234 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 SULT1A1P50225 295 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 INSL3P51460 131 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 BCAP31P51572 246 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 DLK1P80370 383 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 BAXQ07812 192 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 OR1S2Q8NGQ3 325 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 THAP6Q8TBB0 222 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 ELOVL1Q9BW60 279 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 PEMTQ9UBM1 199 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 S4R3C0 116 aa9.02□□□□□ -0.97
SNHG1-221ENST00000544983 PMS2P5A8MQ11 134 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 PPP5D1E7EU14 171 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 OR2C1O95371 312 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 LYL1P12980 280 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 OR10J1P30954 320 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 S100A11P31949 105 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 RND2P52198 227 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 SLURP1P55000 103 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 ELLP55199 621 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-221ENST00000544983 YPEL3P61236 119 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-221ENST00000544983 GAMTQ14353 236 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 ATP6V1FQ16864 119 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 LRRC37A5PQ49AS3 106 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 331.7 ms