RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 RNF24Q9Y225 148 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 TMED3Q9Y3Q3 217 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 CEPT1Q9Y6K0 416 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 A0A0B4J293 547 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 A0A1B0GW64 132 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 FAM90A26D6RGX4 464 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 WRBO00258 174 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 UBE2CO00762 179 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 TSPAN4O14817 238 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 SCAF4O95104 1147 aaKnown RBP4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 CFDP00746 253 aaPredicted RBP4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 HLA-AP01891 365 aaKnown RBP4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 IFNA4P05014 189 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 C8orf88P0DMB2 117 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 VAMP1P23763 118 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 RPL11P62913 178 aaKnown RBP4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 DEFA5Q01523 94 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 SP6Q3SY56 376 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 AARDQ4LEZ3 155 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 C2orf83Q53S99 150 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 SAMD13Q5VXD3 122 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 IL34Q6ZMJ4 242 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 LINC00299Q6ZSB3 139 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 TMED4Q7Z7H5 227 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 SELENOHQ8IZQ5 122 aaKnown RBP4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 CENPSQ8N2Z9 138 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 OR1S2Q8NGQ3 325 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 Q8WTZ3 238 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 GLYATL2Q8WU03 294 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 S100ZQ8WXG8 99 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 RCHY1Q96PM5 261 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 RTBDNQ9BSG5 229 aaPredicted RBP4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 CACNG5Q9UF02 275 aa4.25□□□□□ -1.73
CLSTN3-215ENST00000544584 LOC102724200A0A096LPH7 203 aaPredicted RBP4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TRAV2A0A0B4J234 112 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 IGHV7-4-1A0A0J9YVY3 117 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM213A2RRL7 107 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 HELTA6NFD8 242 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 CGB1A6NKQ9 187 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 I3L2K1 104 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 K7EIM0 57 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 CLN5O75503 358 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 DFFBO76075 338 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 IGKV1-39P01597 117 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 IGKV1-5P01602 117 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 IGKV1D-39P04432 117 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 CTSGP08311 255 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 LYL1P12980 280 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 NPY1RP25929 384 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 GPX4P36969 197 aaPredicted RBP4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TNFRSF9Q07011 255 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM187Q14656 261 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TM4SF20Q53R12 229 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM41BQ5BJD5 291 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 FAAP20Q6NZ36 180 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 MZT2BQ6NZ67 158 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 BTNL8Q6UX41 500 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 CCDC190Q86UF4 302 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM217Q8N7C4 229 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 STPG3Q8N7X2 389 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 SLC24A4Q8NFF2 622 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 DTD1Q8TEA8 209 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 CACNG8Q8WXS5 425 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 SLC35E1Q96K37 410 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 OR10C1Q96KK4 312 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 ASCL2Q99929 193 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 SOSTQ9BQB4 213 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 GGTLC1Q9BX51 225 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 KRTAP3-3Q9BYR6 98 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 SRD5A3Q9H8P0 318 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 SMPXQ9UHP9 88 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 S4R3C0 116 aa4.24□□□□□ -1.73
CLSTN3-215ENST00000544584 IGHV3-21A0A0B4J1V1 117 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 IGHV3-35A0A0C4DH35 117 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 KIR2DL5BA0A0G2JN68 375 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 KIR2DL5BA0A0G2JPC4 375 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 LCE6AA0A183 80 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 ZNF785A8K8V0 405 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 SFT2D2O95562 160 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 P0C879 139 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 RD3LP0DJH9 198 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 RNASE2P10153 161 aaKnown RBP4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 OR10J1P30954 320 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 YPEL3P61236 119 aaPredicted RBP4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 NUTF2P61970 127 aaKnown RBP4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 SNRPD3P62318 126 aaKnown RBP4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 KLF9Q13886 244 aaPredicted RBP4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 ZNF846Q147U1 533 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 HAGHQ16775 308 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 C4orf46Q504U0 113 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 NMSQ5H8A3 153 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 GGNBP1Q5YKI7 109 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM61Q8N0U2 210 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 KIR2DL5AQ8N109 375 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 LRTM2Q8N967 370 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 KIR2DL5BQ8NHK3 375 aa4.23□□□□□ -1.73
CLSTN3-215ENST00000544584 GPR146Q96CH1 333 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms