RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 IGHV3-48P01763 117 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 ANXA3P12429 323 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 SUPT4H1P63272 117 aaKnown RBP10.4□□□□□ -0.74
VAMP1-208ENST00000544432 SRPXP78539 464 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 OR4X1Q8NH49 305 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 FAM110AQ9BQ89 295 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 SLC25A21Q9BQT8 299 aaPredicted RBP10.4□□□□□ -0.74
VAMP1-208ENST00000544432 WFDC10AQ9H1F0 79 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 HIPK2Q9H2X6 1198 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 CHEK1O14757 476 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 YIF1AO95070 293 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 CD5P06127 495 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 AKR1C4P17516 323 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 CCR6P51684 374 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 C2orf83Q53S99 150 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 NMSQ5H8A3 153 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 ZNF600Q6ZNG1 722 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 LGI3Q8N145 548 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 GINS3Q9BRX5 216 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
VAMP1-208ENST00000544432 EDA2RQ9HAV5 297 aa10.39□□□□□ -0.75
VAMP1-208ENST00000544432 HEYLQ9NQ87 328 aaPredicted RBP10.39□□□□□ -0.75
VAMP1-208ENST00000544432 IGHV3OR16-8A0A075B7F1 116 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 RPS10-NUDT3A0A1W2PQS6 291 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 CEBPZOSA8MTT3 80 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 ZNF207O43670 478 aaKnown RBP10.38□□□□□ -0.75
VAMP1-208ENST00000544432 CLN5O75503 358 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 BMI1P35226 326 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 TMEM128Q5BJH2 165 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 SPANXN2Q5MJ10 180 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 TOMM20LQ6UXN7 152 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 NOXA1Q86UR1 476 aa10.38□□□□□ -0.75
VAMP1-208ENST00000544432 RNASEH2CQ8TDP1 164 aaKnown RBP10.38□□□□□ -0.75
VAMP1-208ENST00000544432 TRAV30A0A087WSZ9 112 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 DUXBA0A1W2PPF3 345 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 OR4C46A6NHA9 309 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 SCGB2A1O75556 95 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 OPRK1P41145 380 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
VAMP1-208ENST00000544432 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 SMCO1Q147U7 214 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 FAM90A2PQ658T7 463 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 LYZL2Q7Z4W2 148 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 RNF2Q99496 336 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 SRRQ9GZT4 340 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 HSPB7Q9UBY9 170 aa10.37□□□□□ -0.75
VAMP1-208ENST00000544432 LOC102724200A0A096LPH7 203 aaPredicted RBP10.36□□□□□ -0.75
VAMP1-208ENST00000544432 A0A1B0GU03 582 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 SLC25A4P12235 298 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 LYL1P12980 280 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
VAMP1-208ENST00000544432 MLANAQ16655 118 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 CASC10Q5T4H9 136 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 LRTM2Q8N967 370 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 SLC24A4Q8NFF2 622 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 NDUFA13Q9P0J0 144 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 MRPL36Q9P0J6 103 aaKnown RBP10.36□□□□□ -0.75
VAMP1-208ENST00000544432 PUS1Q9Y606 427 aaKnown RBP eCLIP10.36□□□□□ -0.75
VAMP1-208ENST00000544432 U3KQ87 197 aa10.36□□□□□ -0.75
VAMP1-208ENST00000544432 SLC25A6P12236 298 aa10.35□□□□□ -0.75
VAMP1-208ENST00000544432 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
VAMP1-208ENST00000544432 ETFRF1Q6IPR1 90 aa10.35□□□□□ -0.75
VAMP1-208ENST00000544432 TMED4Q7Z7H5 227 aa10.35□□□□□ -0.75
VAMP1-208ENST00000544432 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
VAMP1-208ENST00000544432 PRR13Q9NZ81 148 aa10.35□□□□□ -0.75
VAMP1-208ENST00000544432 NAP1L6A6NFF2 107 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 PITX3O75364 302 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 IGKV1-17P01599 117 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 NPPCP23582 126 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 NPY1RP25929 384 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 UBE2MP61081 183 aaKnown RBP10.34□□□□□ -0.75
VAMP1-208ENST00000544432 PRSS54Q6PEW0 395 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 OR1S2Q8NGQ3 325 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 RETNQ9HD89 108 aa10.34□□□□□ -0.75
VAMP1-208ENST00000544432 IGHV3-49A0A0A0MS15 119 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 TRAV2A0A0B4J234 112 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 KIR2DL5BA0A0G2JN68 375 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 KIR2DL5BA0A0G2JPC4 375 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 A0A1W2PS18 150 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 UBE2CO00762 179 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 SFT2D2O95562 160 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 IGLC1P0CG04 106 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 CRYBB3P26998 211 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 YPEL3P61236 119 aaPredicted RBP10.33□□□□□ -0.76
VAMP1-208ENST00000544432 PAFAH1B2P68402 229 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 RBMS2Q15434 407 aaKnown RBP10.33□□□□□ -0.76
VAMP1-208ENST00000544432 KIR2DL5AQ8N109 375 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 KIR2DL5BQ8NHK3 375 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 DTD1Q8TEA8 209 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 ST8SIA2Q92186 375 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms