RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 TNFRSF1AP19438 455 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 GCHFRP30047 84 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 ZNF90Q03938 601 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 KRTCAP3Q53RY4 240 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 SLC25A48Q6ZT89 311 aaKnown RBP12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 COMMD5Q9GZQ3 224 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 S4R3C0 116 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 NKX6-3A6NJ46 265 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 MOSP00540 346 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 GATA4P43694 442 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 RND2P52198 227 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 RNASE6Q93091 150 aaKnown RBP12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 NABP2Q9BQ15 211 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 POLQO75417 2590 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 UPK2O00526 184 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 HRASP01112 189 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 PYYP10082 97 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 RTL8BQ17RB0 113 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 FLNCQ14315 2725 aa12.8□□□□□ -0.36
SNRNP70-203ENST00000544278 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 TMEM178BH3BS89 294 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 CA1P00915 261 aaPredicted RBP12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 IL3RAP26951 378 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 BRS3P32247 399 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 FAM169BQ8N8A8 192 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 B4DEV8 164 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 NDUFB3O43676 98 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 OPRK1P41145 380 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 SUMO1P63165 101 aaKnown RBP12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 MMDQ15546 238 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 CR1LQ2VPA4 569 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 TCTEX1D1Q8N7M0 179 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 OR1L6Q8NGR2 347 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 RNASEH2CQ8TDP1 164 aaKnown RBP12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 F6UZH7 168 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 LEMD1Q68G75 181 aa12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 PARD6GQ9BYG4 376 aaPredicted RBP12.79□□□□□ -0.36
SNRNP70-203ENST00000544278 CBLN1P23435 193 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 WT1-ASQ06250 92 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 DNLZQ5SXM8 178 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 C1orf194Q5T5A4 169 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 FNDC4Q9H6D8 234 aaPredicted RBP12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 SRD5A3Q9H8P0 318 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 LSM4Q9Y4Z0 139 aaKnown RBP12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 K7EN84 100 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 LINC00869P0C866 280 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 ASCL2Q99929 193 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 RAXQ9Y2V3 346 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
SNRNP70-203ENST00000544278 H0YJW9 148 aa12.77□□□□□ -0.36
SNRNP70-203ENST00000544278 FLYWCH2Q96CP2 140 aaKnown RBP12.77□□□□□ -0.36
SNRNP70-203ENST00000544278 ZNF430Q9H8G1 570 aaPredicted RBP12.77□□□□□ -0.36
SNRNP70-203ENST00000544278 FOXA2Q9Y261 457 aaPredicted RBP12.77□□□□□ -0.36
SNRNP70-203ENST00000544278 MYO18BQ8IUG5 2567 aa12.77□□□□□ -0.36
SNRNP70-203ENST00000544278 SHISA9B4DS77 424 aa12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 MGST1P10620 155 aaKnown RBP12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 KIAA1644Q3SXP7 199 aa12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 LINC00312Q9Y6C7 94 aa12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 LOXP28300 417 aaPredicted RBP12.77□□□□□ -0.37
SNRNP70-203ENST00000544278 MDFIC2A0A1B0GVS7 189 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 APOA2P02652 100 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 OR5G3P0C626 314 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 ZNF503Q96F45 646 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 FAM208BQ5VWN6 2430 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 CXorf1O96002 111 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 AREGP15514 252 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 PQLC2Q6ZP29 291 aa12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
SNRNP70-203ENST00000544278 ORM2P19652 201 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 PRCDQ00LT1 54 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 LRRC10Q5BKY1 277 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 BLNKQ8WV28 456 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 C22orf15Q8WYQ4 148 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 CSPG4Q6UVK1 2322 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 CELSR2Q9HCU4 2923 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 CFAP46Q8IYW2 2715 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 C20orf202A1L168 122 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 RHOBP62745 196 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 SFRP2Q96HF1 295 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 GAL3ST2Q9H3Q3 398 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 SERTAD4Q9NUC0 356 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 ACACBO00763 2458 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 CGB1A6NKQ9 187 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 F2Z2F3 143 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 LINC00614P0C842 121 aa12.75□□□□□ -0.37
SNRNP70-203ENST00000544278 CDKN1AP38936 164 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms