RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ITLN1Q8WWA0 313 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 SRRM5B3KS81 715 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 RRHO14718 337 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 SPINT2O43291 252 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 REG1AP05451 166 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 LOXL3P58215 753 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 ZNF90Q03938 601 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 MZT1Q08AG7 82 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 SCGB2A2Q13296 93 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 ODF1Q14990 250 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 TMEM204Q9BSN7 226 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 TMEM147Q9BVK8 224 aa12.26□□□□□ -0.45
CHFR-223ENST00000544268 ZFYVE26Q68DK2 2539 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 EPG5Q9HCE0 2579 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 SHISA9B4DS77 424 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 RAB29O14966 203 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 NDUFB4O95168 129 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 GNLYP22749 145 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 VAMP3Q15836 100 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 FAM90A1Q86YD7 464 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 ZCCHC24Q8N2G6 241 aaKnown RBP12.25□□□□□ -0.45
CHFR-223ENST00000544268 ABHD12Q8N2K0 398 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 ZNF114Q8NC26 417 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 OR10G8Q8NGN5 311 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 NEUROG1Q92886 237 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 ZNF48Q96MX3 618 aaPredicted RBP12.25□□□□□ -0.45
CHFR-223ENST00000544268 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
CHFR-223ENST00000544268 IGLC7A0M8Q6 106 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 FCN1O00602 326 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 IFI27L2Q9H2X8 130 aa12.25□□□□□ -0.45
CHFR-223ENST00000544268 MRPL27Q9P0M9 148 aaKnown RBP12.25□□□□□ -0.45
CHFR-223ENST00000544268 IGHV1-46P01743 117 aa12.24□□□□□ -0.45
CHFR-223ENST00000544268 HLA-DRB5Q30154 266 aa12.24□□□□□ -0.45
CHFR-223ENST00000544268 KCNIP2Q9NS61 270 aa12.24□□□□□ -0.45
CHFR-223ENST00000544268 IL36BQ9NZH7 164 aa12.24□□□□□ -0.45
CHFR-223ENST00000544268 LRBAP50851 2863 aa12.24□□□□□ -0.45
CHFR-223ENST00000544268 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 AMTP48728 403 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 PRAMEF5Q5TYX0 476 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 UHRF2Q96PU4 802 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 ABCA4P78363 2273 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 DCHS2Q6V1P9 2916 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 E7EQL1 145 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 MC5RP33032 325 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 OR10J3Q5JRS4 329 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
CHFR-223ENST00000544268 DERL1Q9BUN8 251 aa12.23□□□□□ -0.45
CHFR-223ENST00000544268 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 PLAUP00749 431 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 TNFAIP6P98066 277 aaPredicted RBP12.22□□□□□ -0.45
CHFR-223ENST00000544268 RAI1Q7Z5J4 1906 aaPredicted RBP12.22□□□□□ -0.45
CHFR-223ENST00000544268 A0A1W2PS18 150 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 CD3EP07766 207 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 C3orf79P0CE67 100 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 HTD2P86397 168 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 SLAQ13239 276 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
CHFR-223ENST00000544268 IER3P46695 156 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 ATP5G3P48201 142 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 LGALS4P56470 323 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 PMCHL1Q16048 86 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 C17orf58Q2M2W7 97 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 TMEM249Q2WGJ8 235 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 CT45A1Q5HYN5 189 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 C19orf35Q6ZS72 473 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 MUC15Q8N387 334 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 CT45A3Q8NHU0 189 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 WNT10AQ9GZT5 417 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 CALYQ9NYX4 217 aa12.21□□□□□ -0.45
CHFR-223ENST00000544268 SNURFLB1AK76 121 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 ADH4P08319 380 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 CFHR2P36980 270 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 LRRC10Q5BKY1 277 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 STXBP6Q8NFX7 210 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 OR4F17Q8NGA8 305 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 C1orf159Q96HA4 380 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 GCM1Q9NP62 436 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 DSCAML1Q8TD84 2053 aa12.21□□□□□ -0.46
CHFR-223ENST00000544268 TRBV20OR9-2A0A075B6H5 130 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 MGST3O14880 152 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 SAA2P0DJI9 122 aaPredicted RBP12.2□□□□□ -0.46
CHFR-223ENST00000544268 CD1BP29016 333 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 GATA4P43694 442 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 RIPPLY3P57055 190 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 CCL8P80075 99 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 CCL13Q99616 98 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 MS4A5Q9H3V2 200 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
CHFR-223ENST00000544268 TMEM140Q9NV12 185 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 C17orf112F2Z3M2 114 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 ZNF324O75467 553 aaPredicted RBP12.2□□□□□ -0.46
CHFR-223ENST00000544268 RELBQ01201 579 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms