RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CEACAM1P13688 526 aa12.89□□□□□ -0.35
CHD4-210ENST00000544040 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
CHD4-210ENST00000544040 LOXL4Q96JB6 756 aa12.89□□□□□ -0.35
CHD4-210ENST00000544040 NBR2O15453 112 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 BTCP35070 178 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 ZNF124Q15973 351 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 ATP5L2Q7Z4Y8 100 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 FAM168AQ92567 244 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 OR9G9P0C7N8 305 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 CHCHD5Q9BSY4 110 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 FOXD3Q9UJU5 478 aaPredicted RBP12.88□□□□□ -0.35
CHD4-210ENST00000544040 MDC1Q14676 2089 aaKnown RBP12.88□□□□□ -0.35
CHD4-210ENST00000544040 MYO16Q9Y6X6 1858 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
CHD4-210ENST00000544040 TRAV8-1A0A0A6YYK1 113 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 C15orf61A6NNL5 157 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 UBE2CO00762 179 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
CHD4-210ENST00000544040 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 C1QTNF5Q9BXJ0 243 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 NPIPB13A6NJU9 1138 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 NPIPB5A8MRT5 1133 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 DOCK5Q9H7D0 1870 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 VDAC2P45880 294 aaPredicted RBP12.88□□□□□ -0.35
CHD4-210ENST00000544040 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
CHD4-210ENST00000544040 A0A1W2PRE2 83 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 LINC00527Q9UJ94 153 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 HSD52Q0P140 79 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
CHD4-210ENST00000544040 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 IGLV3-21P80748 117 aaPredicted RBP12.87□□□□□ -0.35
CHD4-210ENST00000544040 EFNB3Q15768 340 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 ZIC4Q8N9L1 334 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
CHD4-210ENST00000544040 LINC00312Q9Y6C7 94 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 CCL1P22362 96 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 ORMDL2Q53FV1 153 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 hDV102S1A0JD36 115 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 VGLL1Q99990 258 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 OSTCQ9NRP0 149 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 PIKFYVEQ9Y2I7 2098 aa12.87□□□□□ -0.35
CHD4-210ENST00000544040 F5P12259 2224 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 OR10W1Q8NGF6 305 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 SP9P0CG40 484 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 RHOGP84095 191 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 CHCHD1Q96BP2 118 aaKnown RBP12.86□□□□□ -0.35
CHD4-210ENST00000544040 TOMM40O96008 361 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 HEPN1Q6WQI6 88 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 TRBV6-7A0A0A0MS04 114 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 LYNX1G3V0Z9 82 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 TNFRSF6BO95407 300 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 LYNX1P0DP58 116 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 LY6G6FQ5SQ64 297 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 LAMTOR3Q9UHA4 124 aa12.86□□□□□ -0.35
CHD4-210ENST00000544040 H0YIZ8 118 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 GHRHP01286 108 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 PSMG4Q5JS54 123 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 LYZL4Q96KX0 146 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 IMMP1LQ96LU5 166 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 SLC50A1Q9BRV3 221 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
CHD4-210ENST00000544040 TIMP3P35625 211 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 LAGE3Q14657 143 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 NSUN5P1Q3KNT7 163 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 CKAP5Q14008 2032 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 A0A087X0K7 114 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 J3QW42 95 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 MORN2Q502X0 79 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 HIST3H2BBQ8N257 126 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 C1orf162Q8NEQ5 155 aaPredicted RBP12.85□□□□□ -0.35
CHD4-210ENST00000544040 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 GREM1O60565 184 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 LTBRP36941 435 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 OR9G4Q8NGQ1 327 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 SCRT1Q9BWW7 348 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 D6R8Y8 96 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 TEX38Q6PEX7 206 aa12.85□□□□□ -0.35
CHD4-210ENST00000544040 AMBPP02760 352 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 IGFBP3P17936 291 aaPredicted RBP12.84□□□□□ -0.35
CHD4-210ENST00000544040 ZNF474Q6S9Z5 364 aaPredicted RBP12.84□□□□□ -0.35
CHD4-210ENST00000544040 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
CHD4-210ENST00000544040 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 PVRIGQ6DKI7 326 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 JPT2Q9H910 190 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 A0A1B0GTI1 187 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 IQCF6A8MYZ5 107 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 BCL6BQ8N143 479 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms