RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 CXCL3P19876 107 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 PAX9P55771 341 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 RAP2BP61225 183 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 CD69Q07108 199 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 ACSM6Q6P461 480 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 TMEM14EPQ6UXP3 125 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 Q6ZNX1 250 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 WFDC9Q8NEX5 89 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 PPP1R1CQ8WVI7 109 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 GGACTQ9BVM4 153 aa9.39□□□□□ -0.91
DDX55-210ENST00000543016 IGHV4OR15-8A0A075B7B6 117 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 A0A087WW49 117 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 ANKRD34BA5PLL1 514 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 NUPL2O15504 423 aaKnown RBP9.38□□□□□ -0.91
DDX55-210ENST00000543016 TGOLN2O43493 480 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 GNG7O60262 68 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 TMEM50AO95807 157 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 ARL3P36405 182 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 P2RY1P47900 373 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 DEFA5Q01523 94 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 RPEL1Q2QD12 228 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 Q56UQ5 140 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 GPHB5Q86YW7 130 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 OR11H7Q8NGC8 314 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 OR10P1Q8NGE3 313 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 SLC35E1Q96K37 410 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 OR4C12Q96R67 309 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
DDX55-210ENST00000543016 SLC25A31Q9H0C2 315 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 C11orf1Q9H5F2 150 aa9.38□□□□□ -0.91
DDX55-210ENST00000543016 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
DDX55-210ENST00000543016 LYRM2Q9NU23 88 aaPredicted RBP9.38□□□□□ -0.91
DDX55-210ENST00000543016 PAIP2BQ9ULR5 123 aaKnown RBP9.38□□□□□ -0.91
DDX55-210ENST00000543016 H3BP45 60 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 BMPR1BO00238 502 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 CLN5O75503 358 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 MPC2O95563 127 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 TSPAN15O95858 294 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
DDX55-210ENST00000543016 GPR183P32249 361 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 BCAP31P51572 246 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 CAV2P51636 162 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 RELQ04864 619 aaPredicted RBP9.37□□□□□ -0.91
DDX55-210ENST00000543016 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
DDX55-210ENST00000543016 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 FAM106AQ4KMX7 169 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 HIST2H2BDQ6DRA6 164 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 PRSS54Q6PEW0 395 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 SLC16A13Q7RTY0 426 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 STX12Q86Y82 276 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 GPR61Q9BZJ8 451 aa9.37□□□□□ -0.91
DDX55-210ENST00000543016 IGHV3-21A0A0B4J1V1 117 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 F8W735 103 aaPredicted RBP9.36□□□□□ -0.91
DDX55-210ENST00000543016 LGALS9O00182 355 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 FABP1P07148 127 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 CTSGP08311 255 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 SULT1A1P50225 295 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 HBG1P69891 147 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 HBG2P69892 147 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 DLK1P80370 383 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 C1QL4Q86Z23 238 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 UBAC2Q8NBM4 344 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 OR1S2Q8NGQ3 325 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 THAP6Q8TBB0 222 aa9.36□□□□□ -0.91
DDX55-210ENST00000543016 RCC1LQ96I51 464 aaKnown RBP9.36□□□□□ -0.91
DDX55-210ENST00000543016 OR2T8A6NH00 312 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 PMS2P5A8MQ11 134 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 PRSS46E5RG02 174 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 NDUFA4O00483 81 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 TRBV12-3P01733 135 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 IGHV3-23P01764 117 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 LYL1P12980 280 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 CD33P20138 364 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 S100A11P31949 105 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 RND2P52198 227 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 BAXQ07812 192 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 GAMTQ14353 236 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 ATP6V1FQ16864 119 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 LRRC37A5PQ49AS3 106 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 C11orf87Q6NUJ2 197 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 REC114Q7Z4M0 266 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 TMEM252Q8N6L7 170 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 RNF126Q9BV68 326 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 ELOVL1Q9BW60 279 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 PEMTQ9UBM1 199 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 S4R3C0 116 aa9.35□□□□□ -0.91
DDX55-210ENST00000543016 FAM24AA6NFZ4 105 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 PPP5D1E7EU14 171 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 H0YIZ8 118 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 OVOL1O14753 267 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 OR2C1O95371 312 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 CFDP00746 253 aaPredicted RBP9.34□□□□□ -0.91
DDX55-210ENST00000543016 IGLC1P0CG04 106 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms