RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 HEATR5BQ9P2D3 2071 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 ZIC4Q8N9L1 334 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 SPTA1P02549 2419 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 TAF1LQ8IZX4 1826 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 NDUFA3O95167 84 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 APOMO95445 188 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 SCN8AQ9UQD0 1980 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 TMEM190Q8WZ59 177 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 CCL19Q99731 98 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
TNC-212ENST00000542877 OR9G9P0C7N8 305 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 CEACAM1P13688 526 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 RNF125Q96EQ8 232 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 CCL3L1P16619 93 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 CA1P00915 261 aaPredicted RBP10.92□□□□□ -0.66
TNC-212ENST00000542877 DERL1Q9BUN8 251 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 VSIRQ9H7M9 311 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 DEPPQ9NTK1 212 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 PSG8Q9UQ74 426 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 BRCA1P38398 1863 aaKnown RBP10.92□□□□□ -0.66
TNC-212ENST00000542877 PYYP10082 97 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
TNC-212ENST00000542877 TMEM133Q9H2Q1 129 aa10.92□□□□□ -0.66
TNC-212ENST00000542877 FOXL1Q12952 345 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 IGKV1-12A0A0C4DH73 117 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 CXCL1P09341 107 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
TNC-212ENST00000542877 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.66
TNC-212ENST00000542877 PSME4Q14997 1843 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 TYMSP04818 313 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 FBLN7Q53RD9 439 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 NUDT11Q96G61 164 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 REG4Q9BYZ8 158 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 TMEM262E9PQX1 116 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 DPM2O94777 84 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 TIMP3P35625 211 aa10.91□□□□□ -0.66
TNC-212ENST00000542877 MST1P26927 711 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 DUX3Q96PT4 197 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 FAM71F2Q6NXP2 309 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 TREML4Q6UXN2 200 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 OR5A1Q8NGJ0 315 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 COQ2Q96H96 371 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 DOCK3Q8IZD9 2030 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 TNFSF13O75888 250 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 CACNG7P62955 275 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 CSRP2Q16527 193 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 ST20Q9HBF5 79 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 DOCK4Q8N1I0 1966 aa10.9□□□□□ -0.66
TNC-212ENST00000542877 AMBPP02760 352 aa10.9□□□□□ -0.67
TNC-212ENST00000542877 OR5AN1Q8NGI8 311 aa10.9□□□□□ -0.67
TNC-212ENST00000542877 GLRX5Q86SX6 157 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 ORAOV1Q8WV07 137 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 NHP2Q9NX24 153 aaKnown RBP10.89□□□□□ -0.67
TNC-212ENST00000542877 CEP290O15078 2479 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 SNRNP200O75643 2136 aaKnown RBP10.89□□□□□ -0.67
TNC-212ENST00000542877 DMRTA2Q96SC8 542 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 IGHV3OR16-8A0A075B7F1 116 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 HAX1O00165 279 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 FAM166AQ6J272 317 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 C8orf46Q8TAG6 207 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 MS4A6AQ9H2W1 248 aa10.89□□□□□ -0.67
TNC-212ENST00000542877 CHD5Q8TDI0 1954 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 CNTFRP26992 372 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 SEC11AP67812 179 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 TNFRSF14Q92956 283 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 NABP1Q96AH0 204 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 GGTLC1Q9BX51 225 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 SIPA1L1O43166 1804 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 IFI27P40305 119 aaPredicted RBP10.88□□□□□ -0.67
TNC-212ENST00000542877 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 FGFBP3Q8TAT2 258 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 F2Z2F3 143 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 NMSQ5H8A3 153 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 RASL11AQ6T310 242 aa10.88□□□□□ -0.67
TNC-212ENST00000542877 FNDC4Q9H6D8 234 aaPredicted RBP10.88□□□□□ -0.67
TNC-212ENST00000542877 PDCD11Q14690 1871 aaKnown RBP10.87□□□□□ -0.67
TNC-212ENST00000542877 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
TNC-212ENST00000542877 ZNF585BQ52M93 769 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 CYSLTR1Q9Y271 337 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 EFNA2O43921 213 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
TNC-212ENST00000542877 LTBRP36941 435 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 GFI1BQ5VTD9 330 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 NUDT10Q8NFP7 164 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 MYOD1P15172 320 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 HSD52Q0P140 79 aa10.87□□□□□ -0.67
TNC-212ENST00000542877 ITLN2Q8WWU7 325 aaPredicted RBP10.87□□□□□ -0.67
TNC-212ENST00000542877 SMPXQ9UHP9 88 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms