RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 NDUFB4O95168 129 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 RAB5BP61020 215 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 ZNF90Q03938 601 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
LDB3-207ENST00000542786 C2CD4CQ8TF44 421 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 SLC25A33Q9BSK2 321 aa11.28□□□□□ -0.6
LDB3-207ENST00000542786 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 NBR2O15453 112 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 IGHV4-39P01824 125 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 LGALS4P56470 323 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 PATE2Q6UY27 113 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.6
LDB3-207ENST00000542786 SLC25A2Q9BXI2 301 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 MRPL32Q9BYC8 188 aaKnown RBP11.27□□□□□ -0.6
LDB3-207ENST00000542786 URGCP-MRPS24S4R325 110 aa11.27□□□□□ -0.6
LDB3-207ENST00000542786 OOSP1A8MZH6 123 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 GOSR1O95249 250 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 MOSP00540 346 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 RNF224P0DH78 156 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 EBI3Q14213 229 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 TBX15Q96SF7 602 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 TRGV9Q99603 122 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 BPESC1Q9GZL8 116 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
LDB3-207ENST00000542786 BIN3Q9NQY0 253 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
LDB3-207ENST00000542786 PFN1P07737 140 aaKnown RBP11.26□□□□□ -0.61
LDB3-207ENST00000542786 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 APELAP0DMC3 54 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 SELENOTP62341 195 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 LCN2P80188 198 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 MMDQ15546 238 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 ETFRF1Q6IPR1 90 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 PQLC2Q6ZP29 291 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 RNF2Q99496 336 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 DOPEY1Q5JWR5 2465 aa11.26□□□□□ -0.61
LDB3-207ENST00000542786 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 I3L2K1 104 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 MT-CO2P00403 227 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 C5orf52A6NGY3 159 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 CORTO00230 105 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 CD24P25063 80 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 C5orf64Q2M2E5 130 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 TNFRSF19Q9NS68 423 aa11.25□□□□□ -0.61
LDB3-207ENST00000542786 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
LDB3-207ENST00000542786 GGTLC3B5MD39 225 aa11.24□□□□□ -0.61
LDB3-207ENST00000542786 PHOX2AO14813 284 aa11.24□□□□□ -0.61
LDB3-207ENST00000542786 TAS2R45P59539 299 aa11.24□□□□□ -0.61
LDB3-207ENST00000542786 SSX2Q16385 188 aa11.24□□□□□ -0.61
LDB3-207ENST00000542786 OR4X1Q8NH49 305 aa11.24□□□□□ -0.61
LDB3-207ENST00000542786 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
LDB3-207ENST00000542786 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
LDB3-207ENST00000542786 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 OR1L4Q8NGR5 311 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 OR2T10Q8NGZ9 312 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 PFDN5Q99471 154 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 ELOVL1Q9BW60 279 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 CD99P14209 185 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 PLP1P60201 277 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 PLGLAQ15195 96 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 ASPHD1Q5U4P2 390 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 C10orf113Q5VZT2 155 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 ANAPC16Q96DE5 110 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
LDB3-207ENST00000542786 TBL2Q9Y4P3 447 aaKnown RBP11.23□□□□□ -0.61
LDB3-207ENST00000542786 IGHV3-21A0A0B4J1V1 117 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 C9JCJ5 164 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 H7BYZ3 331 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 K7EIM0 57 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 OR7C2O60412 319 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 TOX4O94842 621 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 OR10J4P0C629 311 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 IGLC1P0CG04 106 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 UBE2E1P51965 193 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 NDPQ00604 133 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 FXYD3Q14802 87 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 WNT10AQ9GZT5 417 aa11.22□□□□□ -0.61
LDB3-207ENST00000542786 USP9XQ93008 2570 aaPredicted RBP11.22□□□□□ -0.61
LDB3-207ENST00000542786 UBE2CO00762 179 aa11.21□□□□□ -0.61
LDB3-207ENST00000542786 PDLIM4P50479 330 aa11.21□□□□□ -0.61
LDB3-207ENST00000542786 BPIFB3P59826 476 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms