RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	ST8SIA2	Q92186	375 aa		11.77	□□□□□ -0.53
DDX11-222	ENST00000542777	VSIR	Q9H7M9	311 aa		11.77	□□□□□ -0.53
DDX11-222	ENST00000542777	PTTG2	Q9NZH5	202 aa		11.77	□□□□□ -0.53
DDX11-222	ENST00000542777	DEDD	O75618	318 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	CA1	P00915	261 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	APOH	P02749	345 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	CD74	P04233	296 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	SNCA	P37840	140 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	MRPS10	P82664	201 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	BAK1	Q16611	211 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	ZNF600	Q6ZNG1	722 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	LILRB2	Q8N423	598 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	TMEM229B	Q8NBD8	167 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	C15orf40	Q8WUR7	153 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	MFF	Q9GZY8	342 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	MS4A6A	Q9H2W1	248 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	C11orf68	Q9H3H3	251 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	FBXL17	Q9UF56	701 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	KMT2A	Q03164	3969 aa		11.76	□□□□□ -0.53
DDX11-222	ENST00000542777	IGHV3-66	A0A0C4DH42	116 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	ANKRD20A5P	A0PJZ0	165 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	DFFB	O76075	338 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	TMEM50A	O95807	157 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	IFNA4	P05014	189 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	PGAM2	P15259	253 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	DEFB131A	P59861	70 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	RPL11	P62913	178 aa	Known RBP	11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	RBMS2	Q15434	407 aa	Known RBP	11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	LEMD1	Q68G75	181 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	SLC35G3	Q8N808	338 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	OR4C16	Q8NGL9	310 aa		11.75	□□□□□ -0.53
DDX11-222	ENST00000542777	RAB3D	O95716	219 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	IFNA17	P01571	189 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	IGKV1-5	P01602	117 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	PI3	P19957	117 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	RND3	P61587	244 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	KLF9	Q13886	244 aa	Predicted RBP	11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	TMEM187	Q14656	261 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	RNASE10	Q5GAN6	216 aa	Known RBP	11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	SPANXN2	Q5MJ10	180 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	STEAP1B	Q6NZ63	245 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	ZNF486	Q96H40	463 aa	Predicted RBP	11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	ZFAND3	Q9H8U3	227 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	RABL2B	Q9UNT1	228 aa		11.74	□□□□□ -0.53
DDX11-222	ENST00000542777	FRAS1	Q86XX4	4008 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	TRAV2	A0A0B4J234	112 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777		A0A0B4J293	547 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777		A0A1B0GU03	582 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	INS-IGF2	F8WCM5	200 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	DEFB4A	O15263	64 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	AKR1C2	P52895	323 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	SUB1	P53999	127 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	PIGP	P57054	158 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	TAS2R19	P59542	299 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	SSBP1	Q04837	148 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	PVRIG	Q6DKI7	326 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	LHFPL1	Q86WI0	220 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	FAM24B	Q8N5W8	94 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	TP53RK	Q96S44	253 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	TMEM231	Q9H6L2	316 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	RABAC1	Q9UI14	185 aa		11.73	□□□□□ -0.53
DDX11-222	ENST00000542777	ATG12	O94817	140 aa		11.72	□□□□□ -0.53
DDX11-222	ENST00000542777		P0C879	139 aa		11.72	□□□□□ -0.53
DDX11-222	ENST00000542777	RNASE2	P10153	161 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-222	ENST00000542777	NPPC	P23582	126 aa		11.72	□□□□□ -0.53
DDX11-222	ENST00000542777	STH	Q8IWL8	128 aa		11.72	□□□□□ -0.53
DDX11-222	ENST00000542777	PDCD10	Q9BUL8	212 aa		11.72	□□□□□ -0.53
DDX11-222	ENST00000542777	C3orf85	A0A1B0GTC6	90 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777		A0A1W2PS18	150 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	CORT	O00230	105 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	AKAIN1	P0CW23	69 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	HOXA1	P49639	335 aa	Predicted RBP	11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	PPP5C	P53041	499 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	MLANA	Q16655	118 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	OR13C8	Q8NGS7	320 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	C2CD4C	Q8TF44	421 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	ENY2	Q9NPA8	101 aa		11.71	□□□□□ -0.53
DDX11-222	ENST00000542777	DNAH10	Q8IVF4	4471 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	CLN5	O75503	358 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	TBP	P20226	339 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	TRIM16L	Q309B1	348 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	SP6	Q3SY56	376 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	ARRDC1	Q8N5I2	433 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	TMEM230	Q96A57	120 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	METTL26	Q96S19	204 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	MRPL36	Q9P0J6	103 aa	Known RBP	11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	COPZ2	Q9P299	210 aa		11.7	□□□□□ -0.54
DDX11-222	ENST00000542777	LINC00854	A0A1B0GVQ3	168 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777		K7EQG2	157 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	IL7	P13232	177 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	CRYBB3	P26998	211 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	OPRK1	P41145	380 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	TCTA	P57738	103 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	SCGB2B2	Q4G0G5	96 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	STXBP6	Q8NFX7	210 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	OR51S1	Q8NGJ8	323 aa		11.69	□□□□□ -0.54
DDX11-222	ENST00000542777	OR4X1	Q8NH49	305 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms