RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CCL3L1P16619 93 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 ERVK11-1P61568 191 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 MEF2CQ06413 473 aaPredicted RBP6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 DMRTA1Q5VZB9 504 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 GOLT1AQ6ZVE7 132 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 TMUB1Q9BVT8 246 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 PLSCR4Q9NRQ2 329 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 TNCP24821 2201 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 ZGRF1Q86YA3 2104 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 C9JCJ5 164 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 TNFSF13O75888 250 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM53AQ6NSI3 398 aaPredicted RBP6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 KCNS1Q96KK3 526 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 C2orf88Q9BSF0 95 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF257Q9Y2Q1 563 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 J3QR89 54 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 FOXH1O75593 365 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 CD59P13987 128 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 FCGR2BP31994 310 aaPredicted RBP6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 PPOXP50336 477 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 MBNL2Q5VZF2 373 aaKnown RBP6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 NEU1Q99519 415 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 RPUSD1Q9UJJ7 312 aaKnown RBP6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 HILPDAQ9Y5L2 63 aa6.78□□□□□ -1.32
PRKAB1-207ENST00000542698 OR2J3O76001 311 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 CA1P00915 261 aaPredicted RBP6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 HLA-DRB1P01911 266 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 PYYP10082 97 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 GPR6P46095 362 aaPredicted RBP6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 RNFT1Q5M7Z0 435 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 WDR86Q86TI4 376 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 OR10W1Q8NGF6 305 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 C1RLQ9NZP8 487 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 FOXA2Q9Y261 457 aaPredicted RBP6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 BDP1A6H8Y1 2624 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 GTF2H5Q6ZYL4 71 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 ZCCHC24Q8N2G6 241 aaKnown RBP6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 LAMTOR2Q9Y2Q5 125 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 PTPRSQ13332 1948 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 IGKV3-15P01624 115 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 LIPFP07098 398 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 FOXC1Q12948 553 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.33
PRKAB1-207ENST00000542698 DENND4AQ7Z401 1863 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 IGKV1D-17A0A075B6S4 117 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 TMEM189A5PLL7 270 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 TYMSP04818 313 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 OR10J3Q5JRS4 329 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 FGF23Q9GZV9 251 aaPredicted RBP6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 LY96Q9Y6Y9 160 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 A6NDN8 102 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 C17orf100A8MU93 164 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 RALYQ9UKM9 306 aaKnown RBP6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 ZFP30Q9Y2G7 519 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 TRAV5A0A0B4J249 113 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 PPIAL4CA0A0B4J2A2 164 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 OR4C46A6NHA9 309 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 PPIAL4GP0DN37 164 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 CKS2P33552 79 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 C2orf83Q53S99 150 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 OR10AG1Q8NH19 301 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 SLC25A33Q9BSK2 321 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 CLEC7AQ9BXN2 247 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 EPDR1Q9UM22 224 aa6.76□□□□□ -1.33
PRKAB1-207ENST00000542698 CX3CL1P78423 397 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 COTL1Q14019 142 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 CCDC144NLQ6NUI1 221 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 RPP21Q9H633 154 aaKnown RBP6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 IGHV1-69-2A0A0G2JMI3 117 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 A0A1B0GUS0 222 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 TCRBV4S1A1TA0A5B7 111 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 MYOD1P15172 320 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 BMI1P35226 326 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 LEMD1Q68G75 181 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 TCF24Q7RTU0 167 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 C5orf42Q9H799 3197 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 MED12LQ86YW9 2145 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 A0A1B0GUT8 65 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 K7ERU9 68 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 NUDT3O95989 172 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 IGHV1-46P01743 117 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 IL4P05112 153 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 GNG5P63218 68 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 MLANAQ16655 118 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 FBXL15Q9H469 300 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 UFC1Q9Y3C8 167 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 SLC25A15Q9Y619 301 aa6.75□□□□□ -1.33
PRKAB1-207ENST00000542698 ADAMTS9Q9P2N4 1935 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms