RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 OOEPA6NGQ2 149 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 SH2D7A6NKC9 451 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 FOXI3A8MTJ6 420 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF878C9JN71 531 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 C11orf94C9JXX5 98 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 NTN3O00634 580 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 DUX1O43812 170 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ZIC3O60481 467 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 APOA2P02652 100 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 SMIM13P0DJ93 91 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 COX5AP20674 150 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 BLVRBP30043 206 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 SRIP30626 198 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ASIPP42127 132 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 MFAP4P55083 255 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 CLDN2P57739 230 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 TGFBR3Q03167 851 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF146Q15072 292 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 SPATA31B1PQ5VZV4 182 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 C2orf91Q6ZV80 131 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 TCF23Q7RTU1 214 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 LYZL2Q7Z4W2 148 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF525Q8N782 197 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF441Q8N8Z8 693 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 OR2M3Q8NG83 312 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 FLVCR1-AS1Q8TAF5 88 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 LMX1AQ8TE12 382 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 ZNRF4Q8WWF5 429 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 C11orf52Q96A22 123 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 VSTM2LQ96N03 204 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 RBM24Q9BX46 236 aaKnown RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 TMEM222Q9H0R3 208 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 S1PR5Q9H228 398 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 UBTD1Q9HAC8 227 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 OSTCQ9NRP0 149 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 HIGD1BQ9P298 99 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 SLC25A10Q9UBX3 287 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 PILRAQ9UKJ1 303 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 OR1A2Q9Y585 309 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 SOX21Q9Y651 276 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-206ENST00000542685 KIAA2026Q5HYC2 2103 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 TRPM6Q9BX84 2022 aa4.72□□□□□ -1.65
XRCC4-206ENST00000542685 TRGV10A0A0A0MS01 117 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 A0A0G2JNG1 304 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 A0A1W2PRE2 83 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 FNDC10F2Z333 226 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 SSSCA1O60232 199 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 PRKNO60260 465 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 DHRS3O75911 302 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 MOSP00540 346 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 IGHV3-7P01780 117 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 APCSP02743 223 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 HLA-DRB4P13762 266 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 HLA-DOBP13765 273 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 PVRP15151 417 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 IER3P46695 156 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 PAX9P55771 341 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 RPL8P62917 257 aaKnown RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 PSG4Q00888 419 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 MEF2CQ06413 473 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 KIR2DS5Q14953 304 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 MRPL23Q16540 153 aaKnown RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 PHLDA2Q53GA4 152 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 NMSQ5H8A3 153 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 Q6AWC8 147 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 ATP5L2Q7Z4Y8 100 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 DEFB132Q7Z7B7 95 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 MMD2Q8IY49 270 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 ZNF611Q8N823 705 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 OR10G7Q8NGN6 311 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 OR52N5Q8NH56 324 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 PIFOQ8TCI5 191 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 ZPLD1Q8TCW7 415 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 CT55Q8WUE5 264 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 GTSF1Q8WW33 167 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 H1FXQ92522 213 aaKnown RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 C8orf44Q96CB5 159 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 ADAT3Q96EY9 351 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 MAP1LC3CQ9BXW4 147 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 SH2D2AQ9NP31 389 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 BEX4Q9NWD9 120 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-206ENST00000542685 CCL26Q9Y258 94 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 OR2W1Q9Y3N9 320 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 HLA-DRB4X5D2U9 266 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 DOCK8Q8NF50 2099 aa4.71□□□□□ -1.66
XRCC4-206ENST00000542685 DOCK9Q9BZ29 2069 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 TRAV36DV7A0A075B6V5 113 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 IGLV1-36A0A0B4J1U3 117 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 C3orf85A0A1B0GTC6 90 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 A0A1W2PQD3 144 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 C21orf140B9A014 251 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 J3KT08 172 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 SYNGR3O43761 229 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 SLC16A7O60669 478 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 KLF7O75840 302 aaPredicted RBP4.7□□□□□ -1.66
XRCC4-206ENST00000542685 CEACAM4O75871 244 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 CXorf1O96002 111 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms