RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SMIM28A0A1B0GU29 152 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 A0A1B0GX12 115 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 SMIM27A0A1W2PRY6 76 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 A8MZ25 164 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 K7ENP7 123 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 CCL22O00626 93 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 NDUFS7O75251 213 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 MPDU1O75352 247 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 LGALS2P05162 132 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 CRYGAP11844 174 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 CSN1S1P47710 185 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 RPL30P62888 115 aaKnown RBP3.54□□□□□ -1.84
SNHG1-219ENST00000542112 ARFRP1Q13795 201 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 CCL14Q16627 93 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 RTL8BQ17RB0 113 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 CLEC12BQ2HXU8 276 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 RRN3P1Q2M238 152 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 TCF23Q7RTU1 214 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 DTX2Q86UW9 622 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 C15orf53Q8NAA6 179 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 ZNF114Q8NC26 417 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 GJC3Q8NFK1 279 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 OR2T6Q8NHC8 308 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 TAF15Q92804 592 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNHG1-219ENST00000542112 TMEM222Q9H0R3 208 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 KCNK15Q9H427 330 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 DLL3Q9NYJ7 618 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 IL36RNQ9UBH0 155 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 FOXA2Q9Y261 457 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-219ENST00000542112 CHCHD2Q9Y6H1 151 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-219ENST00000542112 SCN2AQ99250 2005 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 MYO16Q9Y6X6 1858 aa3.54□□□□□ -1.84
SNHG1-219ENST00000542112 MYO9BQ13459 2157 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 IGLV3-16A0A075B6K0 115 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 CXorf51AA0A1B0GTR3 108 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 MBD3L5A6NJ08 208 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-219ENST00000542112 A8MWV9 139 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 FAM90A5PA8MXJ8 464 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 F2Z2F3 143 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 MS4A18H0YCH9 400 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 OVOL1O14753 267 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 CHST1O43916 411 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 PDCD6O75340 191 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 ATP5LO75964 103 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 DPM2O94777 84 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 ACTL6BO94805 426 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 LYPD3O95274 346 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 RENP00797 406 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 CECR9P0C854 216 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 IGLC6P0CF74 106 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 SCGB1C2P0DMR2 95 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 ZNF136P52737 540 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 TMEM50BP56557 158 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 NXPH1P58417 271 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 RPS15AP62244 130 aaKnown RBP3.53□□□□□ -1.84
SNHG1-219ENST00000542112 TRIP6Q15654 476 aaKnown RBP3.53□□□□□ -1.84
SNHG1-219ENST00000542112 CDKN3Q16667 212 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 TMEM196Q5HYL7 178 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 CXorf66Q5JRM2 361 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-219ENST00000542112 WDR38Q5JTN6 314 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 C9orf153Q5TBE3 101 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 LYSMD4Q5XG99 296 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 DUX4L9Q6RFH8 374 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-219ENST00000542112 SIGLEC15Q6ZMC9 328 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 FAM231DQ6ZW35 169 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 Q71RC1 249 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-219ENST00000542112 ASCL5Q7RTU5 278 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 LYZL2Q7Z4W2 148 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 SLC22A18ASQ8N1D0 253 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 C10orf126Q8N4M7 172 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 ZNF525Q8N782 197 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 GATD1Q8NB37 220 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 OCC1Q8TAD7 63 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 LRRC29Q8WV35 223 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 BAALCQ8WXS3 180 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 SPATA33Q96N06 139 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 WFDC6Q9BQY6 131 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 TMEM147Q9BVK8 224 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 PBOV1Q9GZY1 135 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 SIRPDQ9H106 197 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 PDFQ9HBH1 243 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 DKK2Q9UBU2 259 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 LAMTOR3Q9UHA4 124 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 R4GMQ9 66 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 V9GYV3 84 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 CPAMD8Q8IZJ3 1885 aa3.53□□□□□ -1.84
SNHG1-219ENST00000542112 COL4A6Q14031 1691 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 hDV102S1A0JD36 115 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 MED19A0JLT2 244 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-219ENST00000542112 SSSCA1O60232 199 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 PAGE4O60829 102 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 NDUFC2O95298 119 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 CLDN7O95471 211 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 PPYP01298 95 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 ACYP1P07311 99 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms