RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ERVK-16P61578 105 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 TNFRSF9Q07011 255 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 PNRC1Q12796 327 aaPredicted RBP6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 GAGE1Q13065 139 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 TMEM30BQ3MIR4 351 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 KLF17Q5JT82 389 aaPredicted RBP6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 SPANXN5Q5MJ07 72 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 SPNS3Q6ZMD2 512 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 TMEM219Q86XT9 240 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 OR4A16Q8NH70 328 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 Q8WTZ3 238 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 LSM10Q969L4 123 aaKnown RBP6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 FLYWCH2Q96CP2 140 aaKnown RBP6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 HIPK2Q9H2X6 1198 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 FBXL15Q9H469 300 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 DPM3Q9P2X0 92 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 WASHC3Q9Y3C0 194 aa6.18□□□□□ -1.42
AC005840.3-201ENST00000541888 BAHCC1Q9P281 2608 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 CEBPZOSA8MTT3 80 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 H3BQ15 152 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 M0QZK8 103 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 NPFFO15130 113 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 SYNGR2O43760 224 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 GGCTO75223 188 aaKnown RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 DFFBO76075 338 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 VENTXO95231 258 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 HBE1P02100 147 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 PRH1P02810 166 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 LINC00614P0C842 121 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 IGHV4-31P0DP07 118 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 SLC25A16P16260 332 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 IL3RAP26951 378 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 TAGLN2P37802 199 aaKnown RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 PAX8Q06710 450 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 ARL16Q0P5N6 197 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 MSMO1Q15800 293 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 USF2Q15853 346 aaPredicted RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 TMEM249Q2WGJ8 235 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 ZNF506Q5JVG8 444 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 OR8G2PQ6IF36 304 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 TMEM183AQ8IXX5 376 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 BCL6BQ8N143 479 aaPredicted RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 KIR3DL3Q8N743 410 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 CFHR4Q92496 578 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 SPIN2AQ99865 258 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 SMR3AQ99954 134 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 SPIN2BQ9BPZ2 258 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 NIPSNAP3BQ9BS92 247 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 FAM103A1Q9BTL3 118 aaKnown RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 GPR61Q9BZJ8 451 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 C11orf1Q9H5F2 150 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 WFDC1Q9HC57 220 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 BEX4Q9NWD9 120 aaPredicted RBP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 GAB2Q9UQC2 676 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 FBXO7Q9Y3I1 522 aa6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 PUS1Q9Y606 427 aaKnown RBP eCLIP6.17□□□□□ -1.42
AC005840.3-201ENST00000541888 DUXBA0A1W2PPF3 345 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 RBFOX3A6NFN3 312 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 B4DSR2 109 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 KBTBD11O94819 623 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 IGHV3-48P01763 117 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 MBP02144 154 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 CXCL1P09341 107 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 TRGC1P0CF51 173 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 OR13C7P0DN81 318 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 FABP4P15090 132 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 VAMP2P63027 116 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 EWSR1Q01844 656 aaKnown RBP eCLIP6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 ZNF266Q14584 549 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 MMDQ15546 238 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 MRGPRG-AS1Q2M3A8 158 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 HAPLN4Q86UW8 402 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 C8orf31Q8N9H6 132 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 OR4C13Q8NGP0 309 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 TAF15Q92804 592 aaKnown RBP eCLIP6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 ADTRPQ96IZ2 230 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 OR4C12Q96R67 309 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 HIST1H2BLQ99880 126 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 PRO1933Q9H354 126 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 ZNF430Q9H8G1 570 aaPredicted RBP6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 PSENENQ9NZ42 101 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 MTORP42345 2549 aa6.16□□□□□ -1.42
AC005840.3-201ENST00000541888 TRBV24-1A0A075B6N3 115 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 CGB1A6NKQ9 187 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 C15orf61A6NNL5 157 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 NCBP2LA6PVI3 153 aaKnown RBP6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 RBFOX2O43251 390 aaKnown RBP eCLIP6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 HRASP01112 189 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 KIR2DS2P43631 304 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 DYNLT3P51808 116 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 UBE2E1P51965 193 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 DSCR9P59020 149 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 LY6EQ16553 131 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 PDPNQ86YL7 162 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 OR2C3Q8N628 320 aa6.15□□□□□ -1.42
AC005840.3-201ENST00000541888 DTD1Q8TEA8 209 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms