RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 P2RY1P47900 373 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 TSPAN5P62079 268 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 CROCCP3Q8IVE0 287 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 LILRB2Q8N423 598 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 SLC35G3Q8N808 338 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 NRG4Q8WWG1 115 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 TMEM230Q96A57 120 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 PDCD10Q9BUL8 212 aa8.85□□□□□ -0.99
SNHG1-216ENST00000541416 TMEM189A5PLL7 270 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 ATG12O94817 140 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
SNHG1-216ENST00000541416 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 PHLDA2Q53GA4 152 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 SEC22AQ96IW7 307 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 FAM210BQ96KR6 192 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 CLEC5AQ9NY25 188 aa8.84□□□□□ -0.99
SNHG1-216ENST00000541416 TRAV30A0A087WSZ9 112 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 A0A1B0GU03 582 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 CRYBB3P26998 211 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 DHRS2Q13268 280 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 TMEM69Q5SWH9 247 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 IZUMO2Q6UXV1 221 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 TBC1D26Q86UD7 250 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 SPARTQ8N0X7 666 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 DCANP1Q8TF63 244 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 MRGPRFQ96AM1 343 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 FXYD6Q9H0Q3 95 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 ENY2Q9NPA8 101 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 CELA1Q9UNI1 258 aa8.83□□□□□ -1
SNHG1-216ENST00000541416 AGRNO00468 2067 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 LOC100506127A0A0U1RQW1 187 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 TEX48A0A1B0GUV7 120 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 INS-IGF2F8WCM5 200 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 CLN5O75503 358 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 CLEC2LP0C7M8 214 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 NAT1P18440 290 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 PRSS3P35030 304 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 HRH1P35367 487 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 OPRK1P41145 380 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 PSMG4Q5JS54 123 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 UBE2NLQ5JXB2 153 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 ZNF767PQ75MW2 155 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 RAB40CQ96S21 281 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 SEPSECSQ9HD40 501 aaKnown RBP8.82□□□□□ -1
SNHG1-216ENST00000541416 RAB26Q9ULW5 256 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 ANAPC10Q9UM13 185 aa8.82□□□□□ -1
SNHG1-216ENST00000541416 RPS10-NUDT3A0A1W2PQS6 291 aa8.81□□□□□ -1
SNHG1-216ENST00000541416 SMIM9A6NGZ8 99 aa8.81□□□□□ -1
SNHG1-216ENST00000541416 HOXA1P49639 335 aaPredicted RBP8.81□□□□□ -1
SNHG1-216ENST00000541416 AKR1C2P52895 323 aa8.81□□□□□ -1
SNHG1-216ENST00000541416 OR4X1Q8NH49 305 aa8.81□□□□□ -1
SNHG1-216ENST00000541416 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 CD74P04233 296 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 HNRNPCP07910 306 aaKnown RBP eCLIP8.8□□□□□ -13e-9■■□□□ 13.7
SNHG1-216ENST00000541416 HLA-DMAP28067 261 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 RPL5P46777 297 aaKnown RBP8.8□□□□□ -1
SNHG1-216ENST00000541416 UCP3P55916 312 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 TAS2R20P59543 309 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 RNF212Q495C1 297 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 SPINK9Q5DT21 86 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 Q8WTZ3 238 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 NEU1Q99519 415 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 XCL2Q9UBD3 114 aa8.8□□□□□ -1
SNHG1-216ENST00000541416 HSPG2P98160 4391 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 GSTZ1O43708 216 aaPredicted RBP8.79□□□□□ -1
SNHG1-216ENST00000541416 IGKV1-39P01597 117 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 IGKV1D-39P04432 117 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 PPP5CP53041 499 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 Q6ZRM9 215 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 YTHDF1Q9BYJ9 559 aaKnown RBP8.79□□□□□ -1
SNHG1-216ENST00000541416 Q9H521 79 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 RNF167Q9H6Y7 350 aa8.79□□□□□ -1
SNHG1-216ENST00000541416 SMIM31A0A1B0GVY4 71 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 RNASE2P10153 161 aaKnown RBP8.78□□□□□ -1
SNHG1-216ENST00000541416 EMP1P54849 157 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 C16orf54Q6UWD8 224 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 Q6ZR54 194 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 LYSMD2Q8IV50 215 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 SAMD12Q8N8I0 201 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 OR1S2Q8NGQ3 325 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 RNASE11Q8TAA1 199 aaKnown RBP8.78□□□□□ -1
SNHG1-216ENST00000541416 RRNAD1Q96FB5 475 aaKnown RBP8.78□□□□□ -1
SNHG1-216ENST00000541416 ZNF486Q96H40 463 aaPredicted RBP8.78□□□□□ -1
SNHG1-216ENST00000541416 NRN1Q9NPD7 142 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 RFNGQ9Y644 331 aa8.78□□□□□ -1
SNHG1-216ENST00000541416 FAM90A26D6RGX4 464 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 ANKRD65E5RJM6 399 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 H3BMM0 161 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 SLC25A4P12235 298 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 PGAM2P15259 253 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 RCVRNP35243 200 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 NUP62P37198 522 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-216ENST00000541416 HTR2BP41595 481 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 FAM3BP58499 235 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 504.2 ms