RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RNF222A6NCQ9 220 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 MFSD2BA6NFX1 497 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 H3BUA1 57 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 ARPC5O15511 151 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 BRI3O95415 125 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 MT-CO2P00403 227 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 ELANEP08246 267 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 HIST1H1BP16401 226 aaKnown RBP7.25□□□□□ -1.25
DDX55-208ENST00000541259 CXCL2P19875 107 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 SULT1A1P50225 295 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 NKX2-5P52952 324 aaPredicted RBP7.25□□□□□ -1.25
DDX55-208ENST00000541259 AP2S1P53680 142 aaPredicted RBP7.25□□□□□ -1.25
DDX55-208ENST00000541259 FOXE3Q13461 319 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 TMEM65Q6PI78 240 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 C18orf65Q6ZTR6 163 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 TMEM217Q8N7C4 229 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 OR1L6Q8NGR2 347 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 C19orf24Q9BVV8 132 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 HSPB11Q9Y547 144 aa7.25□□□□□ -1.25
DDX55-208ENST00000541259 HMSDA8MTL9 139 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 BOLA2-SMG1P6H3BVE0 249 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 IGHV3-11P01762 117 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 OPRK1P41145 380 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 EIF2B2P49770 351 aaKnown RBP7.24□□□□□ -1.25
DDX55-208ENST00000541259 ATP5IP56385 69 aaPredicted RBP7.24□□□□□ -1.25
DDX55-208ENST00000541259 ATP5G2Q06055 141 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 CD69Q07108 199 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 SLC38A11Q08AI6 406 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 FOXL1Q12952 345 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 C15orf32Q32M92 178 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 ZFP69Q49AA0 526 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 AWAT1Q58HT5 328 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 ACOT7LQ6ZUV0 252 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 NOXA1Q86UR1 476 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 ZNF491Q8N8L2 437 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 RNF152Q8N8N0 203 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 NECAP1Q8NC96 275 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 OR10P1Q8NGE3 313 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 MYOZ3Q8TDC0 251 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 RNASEH2CQ8TDP1 164 aaKnown RBP7.24□□□□□ -1.25
DDX55-208ENST00000541259 SCARB1Q8WTV0 552 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 AQP10Q96PS8 301 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 OR5B12Q96R08 314 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 SMIM3Q9BZL3 60 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 SLC25A31Q9H0C2 315 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 SLA2Q9H6Q3 261 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 GNB4Q9HAV0 340 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 WFDC1Q9HC57 220 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 ZC4H2Q9NQZ6 224 aa7.24□□□□□ -1.25
DDX55-208ENST00000541259 A0A1B0GUS0 222 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 FAM223BA6NKX1 122 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 RGS13O14921 159 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 GPX4P36969 197 aaPredicted RBP7.23□□□□□ -1.25
DDX55-208ENST00000541259 NUP62P37198 522 aaPredicted RBP7.23□□□□□ -1.25
DDX55-208ENST00000541259 EXOSC2Q13868 293 aaKnown RBP7.23□□□□□ -1.25
DDX55-208ENST00000541259 GAMTQ14353 236 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 LGALSLQ3ZCW2 172 aaPredicted RBP7.23□□□□□ -1.25
DDX55-208ENST00000541259 SLC16A13Q7RTY0 426 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 STX12Q86Y82 276 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 FAM223AQ8IWN6 122 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 COMMD1Q8N668 190 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 INO80EQ8NBZ0 244 aaPredicted RBP7.23□□□□□ -1.25
DDX55-208ENST00000541259 OR4X2Q8NGF9 303 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 OR5C1Q8NGR4 320 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
DDX55-208ENST00000541259 MFFQ9GZY8 342 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 THYN1Q9P016 225 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 COL6A5A8TX70 2615 aa7.23□□□□□ -1.25
DDX55-208ENST00000541259 TCRBV4S1A1TA0A5B7 111 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 SMCO3A2RU48 225 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 ANKRD34BA5PLL1 514 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 CORTO00230 105 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 CYB5BO43169 146 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 TRBV12-3P01733 135 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 S100A11P31949 105 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 RND2P52198 227 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 DLK1P80370 383 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 BAXQ07812 192 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 CLINT1Q14677 625 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 LAMTOR1Q6IAA8 161 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 ACSM6Q6P461 480 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 UBAC2Q8NBM4 344 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 OR1S2Q8NGQ3 325 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 ZNF502Q8TBZ5 544 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 VN1R17PQ8TDU5 208 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 NPIPB3Q92617 1050 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 EEF1AKMT3Q96AZ1 226 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 ACY3Q96HD9 319 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 USMG5Q96IX5 58 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 HYLS1Q96M11 299 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 CCDC140Q96MF4 163 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 C21orf62Q9NYP8 219 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 FBXL17Q9UF56 701 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 STAB1Q9NY15 2570 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
DDX55-208ENST00000541259 IGKV1D-37A0A075B6S9 117 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 IGKV1OR2-108A0A075B7D4 117 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 A0A0G2JLM5 398 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms