RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 MTCL1Q9Y4B5 1905 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 PAX1P15863 534 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 M0R381 172 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 TMEM171Q8WVE6 324 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 RAX2Q96IS3 184 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 UBTD1Q9HAC8 227 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 TRBV6-6A0A0A6YYG2 114 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 IGKV1-12A0A0C4DH73 117 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 NPFFO15130 113 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 IGKV1D-12P01611 117 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 OR9G9P0C7N8 305 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 GAGE1Q13065 139 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 FAM74A4Q5TZK3 123 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 FOXA2Q9Y261 457 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 SPSB3Q6PJ21 355 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 POLR3KQ9Y2Y1 108 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-207ENST00000541122 RFPL3SP0C7P2 107 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 CECR9P0C854 216 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 MPV17L2Q567V2 206 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 TPTE2P1Q5T6R2 138 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 SCN10AQ9Y5Y9 1956 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 TRAV8-4A0A0B4J246 113 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 UNC13CQ8NB66 2214 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 PATE3B3GLJ2 98 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 F2Z2F3 143 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 PYYP10082 97 aa12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 MAFAQ8NHW3 353 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-207ENST00000541122 SUMO2P61956 95 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-207ENST00000541122 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-207ENST00000541122 FOXC1Q12948 553 aa12.46□□□□□ -0.42
SMARCA4-207ENST00000541122 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.42
SMARCA4-207ENST00000541122 SNHG12Q9BXW3 62 aa12.46□□□□□ -0.42
SMARCA4-207ENST00000541122 SPANXA1Q9NS26 97 aa12.46□□□□□ -0.42
SMARCA4-207ENST00000541122 CEACAM4O75871 244 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 TIAF1O95411 115 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 CKS1BP61024 79 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 CRIM1Q9NZV1 1036 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 LOC285556D6RIA3 1793 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 RNFT1Q5M7Z0 435 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 RP1L1Q8IWN7 2480 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 C9JQL5 133 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 FBXL15Q9H469 300 aa12.45□□□□□ -0.42
SMARCA4-207ENST00000541122 GAGE12BA1L429 117 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 IGKV1-5P01602 117 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 IGLV3-19P01714 112 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 PFN1P07737 140 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 IMMP1LQ96LU5 166 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 DPM3Q9P2X0 92 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 ALPK2Q86TB3 2170 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 SIGLEC12Q96PQ1 595 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 VKORC1Q9BQB6 163 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 NCOR1P1Q9H4R4 102 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 TNFRSF18Q9Y5U5 241 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 CHD5Q8TDI0 1954 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 ITGB1BP1O14713 200 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 HGFACQ04756 655 aa12.44□□□□□ -0.42
SMARCA4-207ENST00000541122 B9A039 149 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 BCL6BQ8N143 479 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 MESP1Q9BRJ9 268 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 IGHV2OR16-5A0A0B4J2B6 119 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 ZNF815PA8K554 130 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 GUSBP1Q15486 140 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 C8orf46Q8TAG6 207 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 FBXL7Q9UJT9 491 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 MUC21A0A0G2JKD1 596 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 MUC21A0A140T8X8 626 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 MUC21Q5SSG8 566 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 CACNA1IQ9P0X4 2223 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 PSG1P11464 419 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 FAM216BQ8N7L0 139 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 MGST2Q99735 147 aa12.43□□□□□ -0.42
SMARCA4-207ENST00000541122 LCTP09848 1927 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 PAX2Q02962 417 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 KLF2Q9Y5W3 355 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 IGKV3D-15A0A087WSY6 115 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 LOC102723996A0A087X1L8 192 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 IGKV3-15P01624 115 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 NABP1Q96AH0 204 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 MMP23AO75900 390 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 ARPC1AQ92747 370 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms