RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ARL6Q9H0F7 186 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 C11orf68Q9H3H3 251 aaKnown RBP5.37□□□□□ -1.55
YBX3-209ENST00000540747 MAP6D1Q9H9H5 199 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 PFDN2Q9UHV9 154 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 LRP1BQ9NZR2 4599 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 F8W735 103 aaPredicted RBP5.36□□□□□ -1.55
YBX3-209ENST00000540747 G3V3Q6 166 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 B3GALNT1O75752 331 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 CFDP00746 253 aaPredicted RBP5.36□□□□□ -1.55
YBX3-209ENST00000540747 DTYMKP23919 212 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 OR2B8PP59922 312 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 ARL6IP1Q15041 203 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 ZNF585BQ52M93 769 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 OR2B11Q5JQS5 317 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 GSG1LQ6UXU4 331 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 RBPMS2Q6ZRY4 209 aaKnown RBP5.36□□□□□ -1.55
YBX3-209ENST00000540747 ZNF546Q86UE3 836 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 SLC51BQ86UW2 128 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 TMEM17Q86X19 198 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 SLC38A6Q8IZM9 456 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 STPG3Q8N7X2 389 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 OR4S2Q8NH73 311 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 COQ8AQ8NI60 647 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 VSTM2AQ8TAG5 236 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 THAP6Q8TBB0 222 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 RBPMSQ93062 196 aaKnown RBP5.36□□□□□ -1.55
YBX3-209ENST00000540747 GALNT14Q96FL9 552 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 CXorf58Q96LI9 332 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 PRELID3BQ9Y3B1 194 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 UFC1Q9Y3C8 167 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 OR2W1Q9Y3N9 320 aa5.36□□□□□ -1.55
YBX3-209ENST00000540747 MUC4Q99102 2169 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 RPS10-NUDT3A0A1W2PQS6 291 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 KANTRA0A1W2PQU2 76 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 FAM25EA8MYX2 175 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 TGOLN2O43493 480 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 PMP2P02689 132 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 REG1AP05451 166 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 FGF2P09038 288 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 SLC25A4P12235 298 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 RPA2P15927 270 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 AKR1C4P17516 323 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 HLA-GP17693 338 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 M6PRP20645 277 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 GPR183P32249 361 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 NUP62P37198 522 aaPredicted RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 H2BFSP57053 126 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 TCTAP57738 103 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 NANOS2P60321 138 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 UBE2MP61081 183 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 RPL8P62917 257 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 CYCSP99999 105 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 POU2AF1Q16633 256 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 TOR2AQ5JU69 321 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 OR5H2Q8NGV7 314 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 VN1R17PQ8TDU5 208 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 PCNPQ8WW12 178 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 HSD17B10Q99714 261 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 SRSF8Q9BRL6 282 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 DAZ1Q9NQZ3 744 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 MED9Q9NWA0 146 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 BET1LQ9NYM9 111 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 TMA7Q9Y2S6 64 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 RBM7Q9Y580 266 aaKnown RBP5.35□□□□□ -1.55
YBX3-209ENST00000540747 HERC1Q15751 4861 aa5.35□□□□□ -1.55
YBX3-209ENST00000540747 IGHV3-35A0A0C4DH35 117 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 C9orf170A2RU37 121 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 C5orf51A6NDU8 294 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 OR4C46A6NHA9 309 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 K7EMT4 169 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 RBFOX2O43251 390 aaKnown RBP eCLIP5.34□□□□□ -1.55
YBX3-209ENST00000540747 RPL35AP18077 110 aaKnown RBP5.34□□□□□ -1.55
YBX3-209ENST00000540747 NAT1P18440 290 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 VAMP1P23763 118 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 ADMP35318 185 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 MFAP2P55001 183 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 DHRS2Q13268 280 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 OR2F1Q13607 317 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 MSMO1Q15800 293 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 ALKAL2Q6UX46 152 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 ZNF66Q6ZN08 573 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 GVQW1Q8N7I0 195 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
YBX3-209ENST00000540747 OR13C8Q8NGS7 320 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 OR4A5Q8NH83 315 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 TERB2Q8NHR7 220 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 NUDCD2Q8WVJ2 157 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 SEC22AQ96IW7 307 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 ATP6V0BQ99437 205 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 CHRDL1Q9BU40 450 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 SLC25A32Q9H2D1 315 aa5.34□□□□□ -1.55
YBX3-209ENST00000540747 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
YBX3-209ENST00000540747 TRAV3A0A0B4J244 114 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 A0A0B4J2A0 478 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 KRBOX1C9JBD0 128 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 NDUFA4O00483 81 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 SSX5O60225 188 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 HRASP01112 189 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 CTSDP07339 412 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms