RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 CORTO00230 105 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 NUPL2O15504 423 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 ZNF207O43670 478 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 GNG7O60262 68 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 HOXB5P09067 269 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 OR4E1P0C645 316 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 OPRK1P41145 380 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 DHRS2Q13268 280 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 SLC24A4Q8NFF2 622 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 ASCL2Q99929 193 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 C20orf24Q9BUV8 137 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 PTTG2Q9NZH5 202 aa13.78□□□□□ -0.2
SNRPA1-203ENST00000540017 ADAP1O75689 374 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 TMEM50AO95807 157 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 GGNBP1Q5YKI7 109 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 LYG2Q86SG7 212 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 DTD1Q8TEA8 209 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 S100ZQ8WXG8 99 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 MARC2Q969Z3 335 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 HIPK2Q9H2X6 1198 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 DAZ1Q9NQZ3 744 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 MRPL27Q9P0M9 148 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 CACFD1Q9UGQ2 172 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 TMED3Q9Y3Q3 217 aa13.77□□□□□ -0.21
SNRPA1-203ENST00000540017 PIGBOS1A0A0B4J2F0 54 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 FRMD6-AS1P0C7T7 363 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 IGHV4-30-4P0DP06 118 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 SLC25A6P12236 298 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 NPY1RP25929 384 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 NPBWR1P48145 328 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 GUCA2BQ16661 112 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 C20orf85Q9H1P6 137 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 TBC1D24Q9ULP9 559 aa13.76□□□□□ -0.21
SNRPA1-203ENST00000540017 C15orf62A8K5M9 175 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 MPTX1A8MV57 137 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 K7EMT4 169 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 TCRBP04435 133 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 CD7P09564 240 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 OR52B4Q8NGK2 314 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 OR4X1Q8NH49 305 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 RNASEH2CQ8TDP1 164 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 OR10C1Q96KK4 312 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 BATF3Q9NR55 127 aa13.75□□□□□ -0.21
SNRPA1-203ENST00000540017 CLN5O75503 358 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 YIF1AO95070 293 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 SCAF4O95104 1147 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 IFNA10P01566 189 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 TOMM20LQ6UXN7 152 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 GTSCR1Q86UQ5 136 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 SBSPONQ8IVN8 264 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 C19orf73Q9NVV2 129 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 U3KQ87 197 aa13.74□□□□□ -0.21
SNRPA1-203ENST00000540017 TRAV6A0A075B6T7 132 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 IGKV1-17P01599 117 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 IAPPP10997 89 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 CD81P60033 236 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 IFITM3Q01628 133 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 NEURL2Q9BR09 285 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 MAGT1Q9H0U3 335 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 WFDC10AQ9H1F0 79 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 ZFAND3Q9H8U3 227 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 PUS1Q9Y606 427 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNRPA1-203ENST00000540017 HUWE1Q7Z6Z7 4374 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 RPS10-NUDT3A0A1W2PQS6 291 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 A8MZ25 164 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 RND2P52198 227 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 ZNF846Q147U1 533 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 TIGITQ495A1 244 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 ZNF600Q6ZNG1 722 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 COQ8AQ8NI60 647 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 NUDT15Q9NV35 164 aa13.72□□□□□ -0.21
SNRPA1-203ENST00000540017 IGHV3OR16-13A0A075B7E8 117 aa13.71□□□□□ -0.21
SNRPA1-203ENST00000540017 IGHV3-74A0A0B4J1X5 117 aa13.71□□□□□ -0.21
SNRPA1-203ENST00000540017 ASAH1Q13510 395 aa13.71□□□□□ -0.21
SNRPA1-203ENST00000540017 TMEM116Q8NCL8 245 aa13.71□□□□□ -0.21
SNRPA1-203ENST00000540017 MITD1Q8WV92 249 aa13.71□□□□□ -0.21
SNRPA1-203ENST00000540017 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-203ENST00000540017 TRAV14DV4A0A0A6YYC5 116 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 TRAV25A0A0B4J276 109 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 CHEK1O14757 476 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 SYNGR2O43760 224 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 UPK1BO75841 260 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 APOHP02749 345 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 NHLRC4P0CG21 123 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 SLC25A4P12235 298 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 RBPMS2Q6ZRY4 209 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 NOXA1Q86UR1 476 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 DEFB125Q8N687 156 aa13.7□□□□□ -0.22
SNRPA1-203ENST00000540017 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms