RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 FAM25CB3EWG5 89 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 FAM25GB3EWG6 89 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 IFNA17P01571 189 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 CD3DP04234 171 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 SNCAP37840 140 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 HOXA1P49639 335 aaPredicted RBP12.58□□□□□ -0.4
PDCD2-207ENST00000539212 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 RNASE10Q5GAN6 216 aaKnown RBP12.58□□□□□ -0.4
PDCD2-207ENST00000539212 OR52I2Q8NH67 350 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 KRTAP17-1Q9BYP8 105 aa12.58□□□□□ -0.4
PDCD2-207ENST00000539212 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.4
PDCD2-207ENST00000539212 DNAH17Q9UFH2 4485 aa12.57□□□□□ -0.4
PDCD2-207ENST00000539212 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
PDCD2-207ENST00000539212 TMEM187Q14656 261 aa12.57□□□□□ -0.4
PDCD2-207ENST00000539212 TRIM16LQ309B1 348 aa12.57□□□□□ -0.4
PDCD2-207ENST00000539212 PVRIGQ6DKI7 326 aa12.57□□□□□ -0.4
PDCD2-207ENST00000539212 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 KNCNA6PVL3 124 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 GIG44P09565 113 aaPredicted RBP12.56□□□□□ -0.4
PDCD2-207ENST00000539212 C4BPBP20851 252 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 OPRK1P41145 380 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 TIGITQ495A1 244 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 Q8NAQ8 132 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 STXBP6Q8NFX7 210 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 ZNF486Q96H40 463 aaPredicted RBP12.56□□□□□ -0.4
PDCD2-207ENST00000539212 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 EXTL2Q9UBQ6 330 aa12.56□□□□□ -0.4
PDCD2-207ENST00000539212 CLN5O75503 358 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 ZNF688P0C7X2 276 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 FAAP20Q6NZ36 180 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 Q6ZRM9 215 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
PDCD2-207ENST00000539212 STHQ8IWL8 128 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 OR13C8Q8NGS7 320 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 MFFQ9GZY8 342 aa12.55□□□□□ -0.4
PDCD2-207ENST00000539212 TRAV2A0A0B4J234 112 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 K7EQG2 157 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 IFNA4P05014 189 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 RBMY1A1P0DJD3 496 aaKnown RBP12.54□□□□□ -0.4
PDCD2-207ENST00000539212 RBMY1CP0DJD4 496 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 NPPCP23582 126 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 P2RY1P47900 373 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 RORCP51449 518 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 RBMY1FQ15415 496 aaKnown RBP12.54□□□□□ -0.4
PDCD2-207ENST00000539212 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 RNASE11Q8TAA1 199 aaKnown RBP12.54□□□□□ -0.4
PDCD2-207ENST00000539212 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 ABHD1Q96SE0 405 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 COPZ2Q9P299 210 aa12.54□□□□□ -0.4
PDCD2-207ENST00000539212 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 CORTO00230 105 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 IGKV1-17P01599 117 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 CD5P06127 495 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 UCP1P25874 307 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 BSXQ3C1V8 233 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 ARRDC1Q8N5I2 433 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 OR4X1Q8NH49 305 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 C2CD4CQ8TF44 421 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 METTL26Q96S19 204 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 TMEM231Q9H6L2 316 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 ENY2Q9NPA8 101 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 CLEC5AQ9NY25 188 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
PDCD2-207ENST00000539212 NXPH3O95157 252 aa12.52□□□□□ -0.41
PDCD2-207ENST00000539212 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
PDCD2-207ENST00000539212 CRYBB3P26998 211 aa12.52□□□□□ -0.41
PDCD2-207ENST00000539212 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDCD2-207ENST00000539212 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
PDCD2-207ENST00000539212 TMEM230Q96A57 120 aa12.52□□□□□ -0.41
PDCD2-207ENST00000539212 DYNC1H1Q14204 4646 aaKnown RBP12.51□□□□□ -0.41
PDCD2-207ENST00000539212 IGLL5B9A064 214 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 CD74P04233 296 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 CTF1Q16619 201 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 ACTL10Q5JWF8 245 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 TERB2Q8NHR7 220 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
PDCD2-207ENST00000539212 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 APLNQ9ULZ1 77 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 X6R8D5 127 aa12.51□□□□□ -0.41
PDCD2-207ENST00000539212 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
PDCD2-207ENST00000539212 A0A1W2PS18 150 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 ATG12O94817 140 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 GABARAPO95166 117 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 RAB3DO95716 219 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 SMIM18P0DKX4 95 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 TBPP20226 339 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 TAS2R19P59542 299 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 MEF2DQ14814 521 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 Q6ZTC4 211 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 TMEM170AQ8WVE7 144 aa12.5□□□□□ -0.41
PDCD2-207ENST00000539212 PKHD1P08F94 4074 aa12.49□□□□□ -0.41
PDCD2-207ENST00000539212 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
PDCD2-207ENST00000539212 ZNF182P17025 639 aaPredicted RBP12.49□□□□□ -0.41
PDCD2-207ENST00000539212 HLA-DMBP28068 263 aa12.49□□□□□ -0.41
PDCD2-207ENST00000539212 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms