RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GPR31O00270 319 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 OR5AC1P0C628 307 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CD99P14209 185 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 AZU1P20160 251 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 PSMB8P28062 276 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 AGTR1P30556 359 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 IFNGR2P38484 337 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 KRTAP12-1P59990 96 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 FOXF1Q12946 379 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF141Q15928 474 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ABCA11PQ4W5N1 156 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 DGAT2L6Q6ZPD8 337 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TCF23Q7RTU1 214 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 GRINAQ7Z429 371 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 DEFB125Q8N687 156 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MIR7-3HGQ8N6C7 128 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 OR2M3Q8NG83 312 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 Q8WTZ3 238 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 PYDC1Q8WXC3 89 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 METTL26Q96S19 204 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 SDF2Q99470 211 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TMBIM4Q9HC24 238 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 NHP2Q9NX24 153 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF492Q9P255 531 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 AK3Q9UIJ7 227 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RPUSD1Q9UJJ7 312 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ERICH3Q5RHP9 1530 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CHD8Q9HCK8 2581 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TRRAPQ9Y4A5 3859 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 SCN9AQ15858 1988 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MPDZO75970 2070 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 HMCN2Q8NDA2 5059 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 KMT2DO14686 5537 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 UGGT2Q9NYU1 1516 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 A0A087WSZ3 146 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV8-1A0A0A6YYK1 113 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LOC389332A0A1B0GUA5 103 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RAB19A4D1S5 217 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TRAPPC13A5PLN9 417 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MEIS3P1A6NDR6 274 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RTL8CO15255 209 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 DLEU1O43261 78 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CYB5R3P00387 301 aaPredicted RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CSN2P05814 226 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 SCTP09683 121 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RPL12P30050 165 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RPL5P46777 297 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RBM11P57052 281 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RPS20P60866 119 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RAB8AP61006 207 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CCL20P78556 96 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 STX5Q13190 355 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 DHRS2Q13268 280 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 HLA-DRB5Q30154 266 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 HACD4Q5VWC8 232 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LRP11Q86VZ4 500 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ZMYND19Q96E35 227 aaPredicted RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00167Q96N53 147 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RBP7Q96R05 134 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 KIFC1Q9BW19 673 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MAP1LC3AQ9H492 121 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TAF9BQ9HBM6 251 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MRPS16Q9Y3D3 137 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 AMMECR1Q9Y4X0 333 aaPredicted RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LAMA3Q16787 3333 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LRRC37A2A6NM11 1700 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 COL6A5A8TX70 2615 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CFAP54Q96N23 3096 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 FN1P02751 2386 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CCDC171Q6TFL3 1326 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1B0GUL6 1792 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 VPS13CQ709C8 3753 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 C4AP0C0L4 1744 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 C4BP0C0L5 1744 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV5A0A0B4J249 113 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV26-2A0A0B4J265 109 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 A6NN06 94 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF727A8MUV8 499 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 PPP5D1E7EU14 171 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 K7ERS5 55 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 SULT1C2O00338 296 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CNIH1O95406 144 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 MSMBP08118 114 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 NQO1P15559 274 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 RPL7P18124 248 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 NPPCP23582 126 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CCR7P32248 378 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CA5AP35218 305 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 CD200P41217 278 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 POLR2HP52434 150 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 GRB2P62993 217 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 GNG3P63215 75 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 PMVKQ15126 192 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 GRK1Q15835 563 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LTC4SQ16873 150 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 ZFP1Q6P2D0 407 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 SLC30A7Q8NEW0 376 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 OR4E2Q8NGC2 313 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 OR11H6Q8NGC7 330 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 OR13C8Q8NGS7 320 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms