RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 S1PR3Q99500 378 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 GFI1Q99684 422 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 RASL11BQ9BPW5 248 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 C20orf144Q9BQM9 153 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SNHG12Q9BXW3 62 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC25A39Q9BZJ4 359 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CXXC4Q9H2H0 198 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR51I2Q9H344 312 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 FBXL15Q9H469 300 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 PLEKHF2Q9H8W4 249 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TAF9BQ9HBM6 251 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 NOX3Q9HBY0 568 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 KCNJ16Q9NPI9 418 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM38BQ9NVV0 291 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MRPL16Q9NX20 251 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SIGLEC8Q9NYZ4 499 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TECRQ9NZ01 308 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 COMMD9Q9P000 198 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 RCC2Q9P258 522 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 COMMD3Q9UBI1 195 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ERG28Q9UKR5 140 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MCTS1Q9ULC4 181 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SIGLEC9Q9Y336 463 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 EXOSC1Q9Y3B2 195 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MED31Q9Y3C7 131 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL36Q9Y3U8 105 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SPIN1Q9Y657 262 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 C2CD3Q4AC94 2353 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ARHGAP32A7KAX9 2087 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 DYSFO75923 2080 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 PRKDCP78527 4128 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 IGLV7-46A0A075B6I9 117 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAV30A0A087WSZ9 112 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 BORCS7-ASMTA0A0B4J1R7 106 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAV39A0A0B4J263 110 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TRGV8A0A0C4DH27 118 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHV1-18A0A0C4DH31 117 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A0G2JLM5 398 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM240AA0A1B0GVK7 77 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A1W2PPI3 338 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 DPRXA6NFQ7 191 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF726A6NNF4 738 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF850A8MQ14 1090 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CEACAM18A8MTB9 384 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FOXI3A8MTJ6 420 aaPredicted RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF705EA8MWA4 302 aaPredicted RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CLDN25C9JDP6 229 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 H3BMQ9 156 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 C15orf65H3BRN8 121 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM178BH3BS89 294 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 J3QR89 54 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 J3QRK9 145 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 AIPO00170 330 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CCL21O00585 134 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 GABRPO00591 440 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 PHOX2AO14813 284 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RBFOX2O43251 390 aaKnown RBP eCLIP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SPINT2O43291 252 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 MMP23AO75900 390 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 YIF1AO95070 293 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 NDUFB2O95178 105 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RENP00797 406 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CD8AP01732 235 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHG1P01857 330 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TFAP2AP05549 437 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CECR9P0C854 216 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAPPC2P0DI81 140 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAPPC2BP0DI82 140 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CD37P11049 281 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CCL1P22362 96 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 NPY1RP25929 384 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CHATP28329 748 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 AQP4P55087 323 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CLDN17P56750 224 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SMIM11AP58511 58 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SNRPGP62308 76 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 BTG1P62324 171 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL24P83731 157 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RUNX1Q01196 453 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF154Q13106 437 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 EIF2B1Q14232 305 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OPCMLQ14982 345 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 PEA15Q15121 130 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SSX1Q16384 188 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 IAH1Q2TAA2 248 aaPredicted RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CEACAM16Q2WEN9 425 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TIMM50Q3ZCQ8 353 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM74A1Q5RGS3 127 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM162BQ5T6X4 162 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM78Q5T7P6 136 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM27BQ5VT28 67 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 NXNL2Q5VZ03 156 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 DHRS11Q6UWP2 260 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TOMM20LQ6UXN7 152 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 IZUMO2Q6UXV1 221 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF730Q6ZMV8 503 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF705AQ6ZN79 300 aaPredicted RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 Q6ZRG5 221 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM19A1Q7Z5A9 133 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms