RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
CLN6-202ENST00000538696 HSD17B13Q7Z5P4 300 aaPredicted RBP13.48□□□□□ -0.25
CLN6-202ENST00000538696 SLC7A5P1Q8MH63 180 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 KLHDC1Q8N7A1 406 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 OR2G3Q8NGZ4 309 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 GNPNAT1Q96EK6 184 aaPredicted RBP13.48□□□□□ -0.25
CLN6-202ENST00000538696 WDR83OSQ9Y284 106 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 RNF114Q9Y508 228 aa13.48□□□□□ -0.25
CLN6-202ENST00000538696 ATRQ13535 2644 aa13.47□□□□□ -0.25
CLN6-202ENST00000538696 SUB1P53999 127 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLN6-202ENST00000538696 C10orf99Q6UWK7 81 aa13.47□□□□□ -0.25
CLN6-202ENST00000538696 WIPF2Q8TF74 440 aaPredicted RBP13.47□□□□□ -0.25
CLN6-202ENST00000538696 TMEM158Q8WZ71 300 aa13.47□□□□□ -0.25
CLN6-202ENST00000538696 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
CLN6-202ENST00000538696 A0A1B0GUS0 222 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 PPIFP30405 207 aaKnown RBP13.46□□□□□ -0.25
CLN6-202ENST00000538696 CD69Q07108 199 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 MLANAQ16655 118 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 NDUFA5Q16718 116 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 AKIRIN2Q53H80 203 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 AWAT1Q58HT5 328 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 BTNL8Q6UX41 500 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 SLC16A13Q7RTY0 426 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 RNF141Q8WVD5 230 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 DMRT1Q9Y5R6 373 aa13.46□□□□□ -0.25
CLN6-202ENST00000538696 LINC00862A6NCI5 91 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 ZNF705EA8MWA4 302 aaPredicted RBP13.45□□□□□ -0.26
CLN6-202ENST00000538696 SOX15O60248 233 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 CTRB1P17538 263 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 CTRB2Q6GPI1 263 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 ZNF329Q86UD4 541 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 FAM110DQ8TAY7 271 aaPredicted RBP13.45□□□□□ -0.26
CLN6-202ENST00000538696 RNASEH2CQ8TDP1 164 aaKnown RBP13.45□□□□□ -0.26
CLN6-202ENST00000538696 PSMG3Q9BT73 122 aaPredicted RBP13.45□□□□□ -0.26
CLN6-202ENST00000538696 FNDC4Q9H6D8 234 aaPredicted RBP13.45□□□□□ -0.26
CLN6-202ENST00000538696 TIMM9Q9Y5J7 89 aa13.45□□□□□ -0.26
CLN6-202ENST00000538696 FNDC10F2Z333 226 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 HAX1O00165 279 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 GPX4P36969 197 aaPredicted RBP13.44□□□□□ -0.26
CLN6-202ENST00000538696 AKR1C1Q04828 323 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 CENPVQ7Z7K6 275 aaPredicted RBP13.44□□□□□ -0.26
CLN6-202ENST00000538696 LRRC20Q8TCA0 184 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 MISP3Q96FF7 219 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 TMEM68Q96MH6 324 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 MGST2Q99735 147 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
CLN6-202ENST00000538696 NPIPB5A8MRT5 1133 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 TEX46H3BTG2 121 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 OPRK1P41145 380 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 SLC35B1P78383 322 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 GAMTQ14353 236 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 TTC9CQ8N5M4 171 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 OR5T1Q8NG75 326 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 WFDC12Q8WWY7 111 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 SLC35E1Q96K37 410 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 NPVFQ9HCQ7 196 aa13.43□□□□□ -0.26
CLN6-202ENST00000538696 MRPL36Q9P0J6 103 aaKnown RBP13.43□□□□□ -0.26
CLN6-202ENST00000538696 LSM4Q9Y4Z0 139 aaKnown RBP13.43□□□□□ -0.26
CLN6-202ENST00000538696 ATP6V1G1O75348 118 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 IGHV3-48P01763 117 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 IGHG4P01861 327 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 PRH1P02810 166 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 CRYGCP07315 174 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 CAMLGP49069 296 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 FHITP49789 147 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 ELLP55199 621 aaPredicted RBP13.42□□□□□ -0.26
CLN6-202ENST00000538696 AKR1C8PQ5T2L2 129 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 ACSM6Q6P461 480 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 Q6ZRG5 221 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 COMMD7Q86VX2 200 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 FAM213BQ8TBF2 198 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 CACNG8Q8WXS5 425 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
CLN6-202ENST00000538696 IGHV3-21A0A0B4J1V1 117 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 UMAD1C9J7I0 102 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 MPDU1O75352 247 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 RAB5CP51148 216 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 PXDC1Q5TGL8 231 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 TMEM144Q7Z5S9 345 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 ZNF709Q8N972 641 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 OR5AU1Q8NGC0 362 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 SAT2Q96F10 170 aaPredicted RBP13.41□□□□□ -0.26
CLN6-202ENST00000538696 ACY3Q96HD9 319 aa13.41□□□□□ -0.26
CLN6-202ENST00000538696 FBN1P35555 2871 aaKnown RBP13.41□□□□□ -0.26
CLN6-202ENST00000538696 C17orf112F2Z3M2 114 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 CORTO00230 105 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 MT-CO2P00403 227 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 PSMB8P28062 276 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 BLOC1S1P78537 153 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 FOXE3Q13461 319 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 TCTEX1D4Q5JR98 221 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 HIST2H2BDQ6DRA6 164 aa13.4□□□□□ -0.26
CLN6-202ENST00000538696 TEPPQ6URK8 271 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms