RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689	VMO1	Q7Z5L0	202 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	MMD2	Q8IY49	270 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	OR10G4	Q8NGN3	311 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	OR10G9	Q8NGN4	311 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	OR10G7	Q8NGN6	311 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	CCL19	Q99731	98 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	MGST2	Q99735	147 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	SIGLEC9	Q9Y336	463 aa		5.64	□□□□□ -1.51
FDFT1-222	ENST00000538689	IGHV2-70D	A0A0C4DH43	119 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	MAP1LC3B2	A6NCE7	125 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	TIMM23	O14925	209 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	MAS1L	P35410	378 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	PDLIM4	P50479	330 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	LCN2	P80188	198 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	RAB31	Q13636	194 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	KHDC3L	Q587J8	217 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	FAM90A2P	Q658T7	463 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	PPP1R27	Q86WC6	154 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	CACNG8	Q8WXS5	425 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	GGTLC1	Q9BX51	225 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	MAP1LC3B	Q9GZQ8	125 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	TPSG1	Q9NRR2	321 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	KCNIP2	Q9NS61	270 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	ABCA1	O95477	2261 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	PDZD2	O15018	2839 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	NPIPB5	A8MRT5	1133 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	SEC14L6	B5MCN3	397 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	CYB5B	O43169	146 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	VENTX	O95231	258 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	COX6B1	P14854	86 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	CNTFR	P26992	372 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	GPX4	P36969	197 aa	Predicted RBP	5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	SUB1	P53999	127 aa	Known RBP eCLIP	5.63	□□□□□ -1.51	2e-11	■■■■■ 36.3
FDFT1-222	ENST00000538689	FGF8	P55075	233 aa	Predicted RBP	5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	KLRD1	Q13241	179 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	ICAM4	Q14773	271 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	HAGH	Q16775	308 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	C10orf55	Q5SWW7	151 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	TMEM144	Q7Z5S9	345 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	SIRPD	Q9H106	197 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	SLC25A22	Q9H936	323 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	GNG13	Q9P2W3	67 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	HILPDA	Q9Y5L2	63 aa		5.63	□□□□□ -1.51
FDFT1-222	ENST00000538689	IGLC7	A0M8Q6	106 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	OOSP1	A8MZH6	123 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	YIF1A	O95070	293 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	BCL2	P10415	239 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	RPL29	P47914	159 aa	Known RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	NPBWR1	P48145	328 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	COMP	P49747	757 aa	Predicted RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	GAMT	Q14353	236 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	TMEM249	Q2WGJ8	235 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	SOHLH1	Q5JUK2	328 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	MINOS1	Q5TGZ0	78 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	LHFPL4	Q7Z7J7	247 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	MISP3	Q96FF7	219 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	PIMREG	Q9BSJ6	248 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	MINOS1-NBL1	R4GNA1	71 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	IGKV1OR2-108	A0A075B7D4	117 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	ZFP92	A6NM28	416 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	DNASE2	O00115	360 aa	Predicted RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	NDUFS8	O00217	210 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	FOXH1	O75593	365 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	SRP19	P09132	144 aa	Known RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	OR13C7	P0DN81	318 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	EDN2	P20800	178 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	CDC34	P49427	236 aa	Predicted RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	TNXA	Q16473	311 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	GCSAML	Q5JQS6	135 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	MIC13	Q5XKP0	118 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	PVRIG	Q6DKI7	326 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	RBMS3	Q6XE24	437 aa	Known RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	ZNF114	Q8NC26	417 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	NPB	Q8NG41	125 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	RXFP4	Q8TDU9	374 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	FAM168A	Q92567	244 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	P2RX4	Q99571	388 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	METTL1	Q9UBP6	276 aa	Known RBP	5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	PXMP4	Q9Y6I8	212 aa		5.62	□□□□□ -1.51
FDFT1-222	ENST00000538689	MAP1A	P78559	2803 aa	Predicted RBP	5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689		A0A1W2PPV4	95 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	FAM74A7	A6NL05	159 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	MOS	P00540	346 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	IFNA1	P01562	189 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	RPL27A	P46776	148 aa	Known RBP	5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	UBE2E1	P51965	193 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	SSBP2	P81877	361 aa	Predicted RBP	5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	SSX2	Q16385	188 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	MLANA	Q16655	118 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	FAM74A3	Q4VXF1	159 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	FBLN7	Q53RD9	439 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	CYB561D1	Q8N8Q1	229 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	SSMEM1	Q8WWF3	244 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	FBXL15	Q9H469	300 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	VAX2	Q9UIW0	290 aa		5.61	□□□□□ -1.51
FDFT1-222	ENST00000538689	CELSR1	Q9NYQ6	3014 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms