RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 PRR20DP86480 221 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 PRR20BP86481 221 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 PRR20AP86496 221 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 KIR2DS5Q14953 304 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 MIR17HGQ75NE6 70 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 Q8TCH9 128 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 RLN3Q8WXF3 142 aa10.17□□□□□ -0.78
USP3-203ENST00000538686 TSACCQ96A04 125 aaPredicted RBP10.17□□□□□ -0.78
USP3-203ENST00000538686 CITED2Q99967 270 aaPredicted RBP10.17□□□□□ -0.78
USP3-203ENST00000538686 MRPS17Q9Y2R5 130 aaKnown RBP10.17□□□□□ -0.78
USP3-203ENST00000538686 MANSC4A6NHS7 340 aaPredicted RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 SHISA9B4DS77 424 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 SRD5A1P18405 259 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 GNG3P63215 75 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 Q6P435 159 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 CEND1Q8N111 149 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 HLA-DRB4P13762 266 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 NMUP48645 174 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 PPP1CAP62136 330 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 RPL30P62888 115 aaKnown RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 EIF4EBP1Q13541 118 aaPredicted RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 RSPO4Q2I0M5 234 aaPredicted RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 RBPMS2Q6ZRY4 209 aaKnown RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 PRELID3AQ96N28 172 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 CITED1Q99966 193 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 RPP21Q9H633 154 aaKnown RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
USP3-203ENST00000538686 HLA-DRB4X5D2U9 266 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 DNAH12Q6ZR08 3092 aa10.16□□□□□ -0.78
USP3-203ENST00000538686 A0A087WX48 190 aa10.15□□□□□ -0.78
USP3-203ENST00000538686 IGLV3-32A0A0A0MS00 114 aa10.15□□□□□ -0.78
USP3-203ENST00000538686 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
USP3-203ENST00000538686 NCR2O95944 276 aa10.15□□□□□ -0.78
USP3-203ENST00000538686 PPDPFLQ8WWR9 84 aa10.15□□□□□ -0.78
USP3-203ENST00000538686 C18orf15Q96N68 181 aa10.15□□□□□ -0.78
USP3-203ENST00000538686 A0A1W2PNR3 127 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 NPIPB6E9PJ23 425 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 APOHP02749 345 aaPredicted RBP10.14□□□□□ -0.79
USP3-203ENST00000538686 SRYQ05066 204 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 TMEM178AQ8NBL3 297 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 TMEM116Q8NCL8 245 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
USP3-203ENST00000538686 MRPL32Q9BYC8 188 aaKnown RBP10.14□□□□□ -0.79
USP3-203ENST00000538686 DLL3Q9NYJ7 618 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 PCDH15Q96QU1 1955 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 RHODO00212 210 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 ID1P41134 155 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 SPINK9Q5DT21 86 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 MOGAT3Q86VF5 341 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
USP3-203ENST00000538686 AMMECR1Q9Y4X0 333 aaPredicted RBP10.14□□□□□ -0.79
USP3-203ENST00000538686 PRSS29PA6NIE9 313 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 K7ERJ3 54 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 HAX1O00165 279 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 NHLRC4P0CG21 123 aaPredicted RBP10.13□□□□□ -0.79
USP3-203ENST00000538686 MPV17P39210 176 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 PCBD1P61457 104 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 RRN3P1Q2M238 152 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 PCP2Q8IVA1 136 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 RNF138Q8WVD3 245 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 COQ2Q96H96 371 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 ZNF414Q96IQ9 312 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 NABP2Q9BQ15 211 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 C7orf69Q9H7B7 122 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 ZNF492Q9P255 531 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 VPREB3Q9UKI3 123 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 F11RQ9Y624 299 aaKnown RBP10.13□□□□□ -0.79
USP3-203ENST00000538686 EXPH5Q8NEV8 1989 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 TRGV8A0A0C4DH27 118 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 PEX7O00628 323 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 C8orf88P0DMB2 117 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
USP3-203ENST00000538686 GAB4Q2WGN9 574 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 Q6Q795 121 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 ZNF497Q6ZNH5 498 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 OR8A1Q8NGG7 326 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 PRSS3P2Q8NHM4 247 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 C1orf159Q96HA4 380 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 HSD17B10Q99714 261 aaKnown RBP10.13□□□□□ -0.79
USP3-203ENST00000538686 PRDM14Q9GZV8 571 aa10.13□□□□□ -0.79
USP3-203ENST00000538686 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 C5orf49A4QMS7 147 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 C17orf98A8MV24 154 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 GFRA3O60609 400 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 TM4SF20Q53R12 229 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 PRSS22Q9GZN4 317 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 KLRF1Q9NZS2 232 aa10.12□□□□□ -0.79
USP3-203ENST00000538686 TIMM8BQ9Y5J9 83 aaPredicted RBP10.12□□□□□ -0.79
USP3-203ENST00000538686 ACTL6BO94805 426 aa10.11□□□□□ -0.79
USP3-203ENST00000538686 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
USP3-203ENST00000538686 PF4V1P10720 104 aa10.11□□□□□ -0.79
USP3-203ENST00000538686 CA6P23280 308 aa10.11□□□□□ -0.79
USP3-203ENST00000538686 PRSS12P56730 875 aa10.11□□□□□ -0.79
USP3-203ENST00000538686 CACNG7P62955 275 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms