RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 NBR2O15453 112 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 OR10J4P0C629 311 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 NPPCP23582 126 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 SPNS3Q6ZMD2 512 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 IGKV1D-37A0A075B6S9 117 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 URGCP-MRPS24S4R325 110 aa11.23□□□□□ -0.61
ACTN1-205ENST00000538545 SEC14L6B5MCN3 397 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 CEACAM3P40198 252 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
ACTN1-205ENST00000538545 ZNF343Q6P1L6 599 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 MXRA5Q9NR99 2828 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 C11orf94C9JXX5 98 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 STAG3L2P0CL84 134 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 STAG3L3P0CL85 134 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 PRB4P10163 310 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-205ENST00000538545 PSMB3P49720 205 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 RAB31Q13636 194 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 FXYD3Q14802 87 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 WNT10AQ9GZT5 417 aa11.22□□□□□ -0.61
ACTN1-205ENST00000538545 SONP18583 2426 aaKnown RBP11.21□□□□□ -0.61
ACTN1-205ENST00000538545 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
ACTN1-205ENST00000538545 MT-CO2P00403 227 aa11.21□□□□□ -0.61
ACTN1-205ENST00000538545 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
ACTN1-205ENST00000538545 ZFP82Q8N141 532 aa11.21□□□□□ -0.61
ACTN1-205ENST00000538545 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.61
ACTN1-205ENST00000538545 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
ACTN1-205ENST00000538545 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.61
ACTN1-205ENST00000538545 YTHDF2Q9Y5A9 579 aaKnown RBP11.21□□□□□ -0.61
ACTN1-205ENST00000538545 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.62
ACTN1-205ENST00000538545 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.62
ACTN1-205ENST00000538545 TMEM219Q86XT9 240 aa11.21□□□□□ -0.62
ACTN1-205ENST00000538545 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.62
ACTN1-205ENST00000538545 ZNF503Q96F45 646 aa11.21□□□□□ -0.62
ACTN1-205ENST00000538545 SSX3Q99909 188 aa11.21□□□□□ -0.62
ACTN1-205ENST00000538545 UNKLQ9H9P5 680 aaKnown RBP11.21□□□□□ -0.62
ACTN1-205ENST00000538545 CREBBPQ92793 2442 aa11.21□□□□□ -0.62
ACTN1-205ENST00000538545 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 CLEC2AQ6UVW9 174 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 RBMS3Q6XE24 437 aaKnown RBP11.2□□□□□ -0.62
ACTN1-205ENST00000538545 PARLQ9H300 379 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 IGHV3-23P01764 117 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 TMEM11P17152 192 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 HNF1AP20823 631 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 SUB1P53999 127 aaKnown RBP eCLIP11.2□□□□□ -0.62
ACTN1-205ENST00000538545 CX3CL1P78423 397 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 CYP2G1PQ6ZSU1 146 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 SMIM7Q9BQ49 75 aa11.2□□□□□ -0.62
ACTN1-205ENST00000538545 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 COLCA2A8K830 154 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 OR7C2O60412 319 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 IFNA1P01562 189 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 ORM2P19652 201 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 HABP2Q14520 560 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-205ENST00000538545 LEMD1Q68G75 181 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 LOC105371267A0A1B0GV96 52 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 GCHFRP30047 84 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 UBE2E1P51965 193 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 SMDT1Q9H4I9 107 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
ACTN1-205ENST00000538545 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
ACTN1-205ENST00000538545 NDUFB4O95168 129 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 OR5G3P0C626 314 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 PYYP10082 97 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 RHOBP62745 196 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
ACTN1-205ENST00000538545 C22orf15Q8WYQ4 148 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 KLF2Q9Y5W3 355 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-205ENST00000538545 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 NDUFA3O95167 84 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 COX6B1P14854 86 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 ADIRFQ15847 76 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 CLEC12BQ2HXU8 276 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 C2CD4CQ8TF44 421 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
ACTN1-205ENST00000538545 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-205ENST00000538545 H3BTX0 84 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 AVPP01185 164 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 CRYBA1P05813 215 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-205ENST00000538545 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 SMCO4Q9NRQ5 59 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 FUT9Q9Y231 359 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 NPFFO15130 113 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms